Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1688 ATGGGAGAAAGAGAGTCAATGTCAGTTTGGGAGGAGAAGAAAGAAGAAGAAGAAGCTCAATTGGATATTTGGAAATACATATATGGGTTCGTTGAACAGGCAGTTGTGAAATGTGGAATTGAACTTGGAATAGCTGAAGCCATTGAAAGCCATGGAGGTCCCATCACACTCTCTCACTTGTCATCAACTATAAGTTGTGACCCTTCCCTTCTTCACCGCATCATGAGATTCCTTACTTACCGCAACATATTCAAAACCATTCCTATCCATCAGGATCTGCAGGATGACTATGGCTATGTCCAAACACCCCTTTCTCGCCGCTTGATGAGAAATGGAAAACAAAGCATGGCTGCTATCATTCTTCTTGAGAGTAGTCCTGTGATGCTAGCACCATGGCATAGTCTAAGCACTCATGTTCTTGCCAATGGCAAACCCTCAATTCAAAAGGCATTGGGTGAAGACTTGCTAAGCTATGCTGCTGCTAATCTTGACCACAGTAATCTCTACAATGAAGGAACTGCATGTGATGCTAAGCAGACTATGAATGCCATCATTGAAGGATGCATTCAGGTTTTTGATGGTGTTAGTAGCTTGGTGGATGTGGGTGGTGGAAATGGCATAACTATTCACATCTTGGTTAAGGCTTGTCCTTGGATAAGAGGATTCAATTTTGATCTTCCTCATGTCATTGATGTGGCCCCACTTTATTGTGATGGGGTGGAACATGTTGCTGGAGACATGTTTCTAAGTGTTCCTAAAGCTGATGTTGCTTTTCTTATGGTAAAGCAAGCTAGACGGTGGATGCTGCATAGTTGGGGAGATGAAGAGTGCATTAAGATCTTAAAGAAGTGTAAGGAAGCCGTTCCAAGGGAAAGTGGAAGGGTTATGATTGTAGAGGCAGTGATTGAAGAAGGAGGGAAACAAGGTAGCTTAAAGGATGTAGGGTTGATGCTGGACATGGTAATGATGGCACATACCAACTTTGGCAAAGAGAGGACACTCAAAGAATGGGAATATGTTATCAAAATGGCTGGATTCACTACATACACTCTCATACCCATCCCTAATCTTGTCAAGTCTTTGATTATAGCTTTTCCATGA 1101 0.4242 MGERESMSVWEEKKEEEEAQLDIWKYIYGFVEQAVVKCGIELGIAEAIESHGGPITLSHLSSTISCDPSLLHRIMRFLTYRNIFKTIPIHQDLQDDYGYVQTPLSRRLMRNGKQSMAAIILLESSPVMLAPWHSLSTHVLANGKPSIQKALGEDLLSYAAANLDHSNLYNEGTACDAKQTMNAIIEGCIQVFDGVSSLVDVGGGNGITIHILVKACPWIRGFNFDLPHVIDVAPLYCDGVEHVAGDMFLSVPKADVAFLMVKQARRWMLHSWGDEECIKILKKCKEAVPRESGRVMIVEAVIEEGGKQGSLKDVGLMLDMVMMAHTNFGKERTLKEWEYVIKMAGFTTYTLIPIPNLVKSLIIAFP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1688 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 363 IPR029063 -
Lal17g1688 366 PANTHER O-METHYLTRANSFERASE 10 358 IPR016461 GO:0008168
Lal17g1688 366 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 10 358 - -
Lal17g1688 366 PIRSF O-mtase 2 366 IPR016461 GO:0008168
Lal17g1688 366 Pfam O-methyltransferase domain 132 346 IPR001077 GO:0008171
Lal17g1688 366 SUPERFAMILY "Winged helix" DNA-binding domain 13 112 IPR036390 -
Lal17g1688 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 366 IPR016461 GO:0008168
Lal17g1688 366 Gene3D Vaccinia Virus protein VP39 110 363 IPR029063 -
Lal17g1688 366 Gene3D - 6 108 IPR036388 -
Lal17g1688 366 Pfam Dimerisation domain 35 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1688 Lal-Chr17 18046863 18048380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1688 1 346 Monolignol Biosynthesis Gene Families AT5G54160 33.146 2.53e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1688 K22588 - gmx:100782951 447.203