Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1677 ATGGTTCATCACCCCAAACTCATACTCATCTTATTGTTCTTCAGCATAAACATTGCAAAGGCAGATAATAATGATGAAAGTGCAACCATGTCTTCACTCCTCAAATCTCTCTCACCAACACCATCTTCTTGGTCATCCACTACTTCTTACTGTTCTTGGAAAGGCATCAAATGTGACTCTTCTAACCGAGTCACAACCATTAATCTTGCTTCCAACTCACTCACTGGAACATTACCCACTTCCCTCAACTCCCTCTCTCAACTCACCACTCTCTCTCTTCAGAACAACGCTCTCTCTGGCCCCATCCCTTCTCTCTCTAACCTCACCAATCTCCAAACTGTTTTCCTTCACTCTAACAACTTCACCTCTATCCCCTTTAACTGCTTCTCCGGGTTACCCACTCTCCACACCCTCAGCTTGACTCAGAATCTTAACCTCAAACCTTGGACCATTCCTAACGACTTCTCTCACTCCTCCAATTTGGTTCAACTCGATTTTGGAACCTCAAACCTTGTTGGTTCCTTACCTGATATGTTCGATTCGTTGCCCAGCTTGCAAAGTTTGCGTCTTTCTTACAATAACTTATCTGGGTCCTTGCCCAAATCCTTCTCAGGTTCTAACATCCAGAATCTCTGGCTCAATAACCAGAATGATGGGTTTGGGTTTGAGGGTGGAATTGATGTGCTTTCTGGGATGGTGCATTTGAATCAGGTTTGGCTTCATAAGAATAAGTTAACGGGTTCAATTCCTGATTTGTCCAATTGCTCCAGCTTGTCTGATTTGCAGCTTAGGGATAATATGTTAACTGGGGTTGTTCCTGAATCTTTGATGGGGATGTCTAGTTTGAAGACTGTGTCTTTAGATAATAACATGTTGCAGGGTCCTGTTCCTGTGTTCGGGAAAGGTGTTCAGGTTACACTTGATGGGATTAATAGCTTTTGTTCAACAAAACCTGGGGAAGCTTGTGATCCAATGGTGAATGCTTTGCTTGAGGTTGCTATGGGTTTCGGGTATCCAGTTAGGTTGGCGAATTCGTGGCAAGGTAATGATCCTTGTAATGATTGGAGTTTTGTTGTGTGTGCTGAGGGAAAGATTGTTACAGTTAATTTAGAGAAGCAGGGTTTGAATGGAACAATCTCACCCGCATTTGCGAATCTGACTGATTTGAGAAACTTGTATTTGAGTGGTAATAATTTGACTGGTTCAATTCCGGATAGCTTGGTGAGTTTGGCTCAGCTTGATGTTCTGGATGTTTCTAATAATAACCTATCTGGCGAGATTCCTAAATTTGGAGGTAGAGTAAAGATTACTAGTAATGGGAATGCTTTGCTTGTAAAGCCTGGAGGAGGAGGAGGAGGAGGTAGTGGAACCAGTCCATCAGCAAATTCTGGTAATGCACCGGGTGGAAGCCCTTCGAAAATGGGGAACAGTAGTTCTCTGTCGCCTGGTTGGATTGCAGGTATAGCTATTATTGCTGTATTTTTCGTTGCAGTCGTGTTGTTTGTCTTTTGCAAGTGTTATGCTAAAAATCGGCACAGGAAATTCGGAAGGGTTGACAATCCTGAATTCAGAAAAGGAGAGGTTAAGATTGATGTATTGAGTAATTCCAATGGACATGGTGGAGTTCCGAGCGAGTTACAAAGCCAGGGGAGTGATCGTAGTGACCTTCCTGTTTTTGAGGGTGGGAATGTTGCAATTTCGTTCCAAGTTCTTCGGCAAGTAACTGATAATTTCAGTGAGGATAACATTTTGGGCAGGGGAGGGTTTGGAGTTGTATATAAAGGGGAACTGCATGATGGGACTAAAATTGCGGTGAAGAAGATGGAATCTGTTGCTATGGGAAGTAAAAAAATGAACGAGTTCCAAGCTGAGATTGCGGTTCTCACTAAAGTTAGGCATAGGCATTTGGTTGCTCTTTTAGGATACTGCATAAATGGCAATGAAGGGCTTTTGGTGTACGAGTATATGCCTCAAGGGACATTAACACAGCATCTGTTTGATTGGCATGATAATGGTTGTGCACCTTTGACATGGAAACAAAGGGTGGCGATAGCTTTGGATGTAGCACGGGGAGTGGAATATTTGCATAGCTTAGCTCAGCAAAGCTTCATTCACAGAGACTTGAAACCCTCCAACATACTATTGGGTGATGACATGAGAGCTAAGGTTGCTGATTTTGGATTGGTTAAAAATGCACCAGATGGGAAGTATTCTGTTGAGACGCGGTTGGCTGGAACATTTGGGTATCTTGCACCTGAATATGCAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTAGCATTGATGTTTTCTCCTATTTCAGTCTTGGTATTCTCTGGTGTCTCTGACATGTCTTCTGTTACAAACTTTTCAAATGTGAATTCCACATTTTTTACTAGCATTACATTTTTGCATTTTATAAAAGCATGCCGTAAAATTTTGTTCATCTTTGCCTGTTGTTTAGTCATGGCGAACGTGGTTTTCGCGGAGCTAGATTATTTTGACATCGAATCTACGGGAAGAGTGACAACCAAAGTTGATGTCTATGCCTTCGGAGTTGTATTGATGGAACTGATTACAGGAAGAAAGGCACTGGATGATACGGTGCCGGACGAAAGGTCTCACTTGGTTTCATGGTTCCGTAGGGTACTGATTAACAAAGAGAACATCCCCAAGGCAATTGATCAAACTCTAAACCCGGATGAGGAAACTATGGAGAGCATTTATAAGGTGGCGGAGCTGGCAGGCCATTGTACTGCTCGGGAACAGTACCAAAGGCCGGATATGGGGCATGCGGTGAATGTGTTGGTTCCTCTTGTAGAGCAATGGAAGCCTAGTAGTAGCCATGGAGAAGAAGGTGATGGGATTGACTTACAAATGAGCCTTCCTCAAGCTCTAAGAAGATGGCAAGCCAATGAAGGCACTTCCTCTATGTTCAATGACATGTCTTTCTCACAAACTCAAACAAGTCTTCCTTCAAGAATTGCAGACTCATTTGATTCCATGGATTGCCGGTTCAATTACTACTTTCTTCAGAATTGTAACTCCCTTACTACAGGCACTGACAGACCCAACATGTGTCCTTACATGGAAAACCTTGGTTTAGGTCCTAACATTCATAACACTGAAGGCCTTTTCCACAACACTAGTTCTAGTTCTAGTTCTAGTTGGTATGCTACCAACCAATTCTTATTGGAGGTGATTTTCCACAACAAGATGAGAAAATATGAATGCTTGACCAATGATTCATCTTTGGCTAATGCAATTTTTGTGCCTTACTATGCTGGTCTTGATGTGAGTCAATTCCTTTGGGTTTCTAATATCACAATAAGAGATTCTTCTGGTAAAGAACTACTTCAATGGCTTTCCAAAAGAGATGAGTGGAAGAAAATGTGGGGTATGGATCATTTTCTTGTTTCAGGTAGGATTTCTTGGGATTTAAGGAGACAATTTGATAATGAGTCATATTGGGGTAGCAAATTTAGATTTTTACCCGAATCAATGAACATGTCAATGCTAGCAGTTGAGGCAAGTTCATGGAAAAATGACTATGCTATACCATACCCAACTTCTTTTCATCCCTCAAGTGAAAGTGAAGTTTTGCAATGGCAAAGTAAAATGAGGCTTCAAAAAAGGCCTTACTTGTTTACTTTCACCGGTGCTCCAAGGCCAGAACTCAAGGGTTCTATAAGGGGAAGAGTCATAGAGCAATGTTTAGGTTCTAGTGCTTGCAAATTCATAAATTGCAGCTATGGTAGTGGAGAGAAATGTGATGACCCTGTTAATGTTATGAAAGTGTTTTCAAATTCTGTTTTCTGTTTGCAACCTCCTGGTGATTCATACACAAGAAGATCAATTTTTGATTCAATGTTGGCTGGTTGTGTTCCTGTTTTCTTTCATCCTGGCACTGCATATTCACAATATAAATGGTTTTTACCAAACAATAGTACTAAGTATTCTGTGTATATTCCAGTGAAGGATGTGAAAGAGTGGAACGTGAATGTGGAGAAGGTGCTGATGGGAATATCACAAGATGAGGTGGTTGCAATGAGAGAGGAGGTTATAAACCTGATTCCAAATATAATTTATGCAAATCCTAAGTCAAAGTTAGATAAGATTGAAGATGCTTTTGATTTAGCAGTAAAAGGGATACTTGAAAGGATAGAGGAAGTGAGGGAAGCAATGAAGAATGGGAGAGATCCTAGCATTGGTTTTGCAGATGAAGATCATTATAAGTATACATTTTCAGATAATCATAGTTAA 4338 0.4103 MVHHPKLILILLFFSINIAKADNNDESATMSSLLKSLSPTPSSWSSTTSYCSWKGIKCDSSNRVTTINLASNSLTGTLPTSLNSLSQLTTLSLQNNALSGPIPSLSNLTNLQTVFLHSNNFTSIPFNCFSGLPTLHTLSLTQNLNLKPWTIPNDFSHSSNLVQLDFGTSNLVGSLPDMFDSLPSLQSLRLSYNNLSGSLPKSFSGSNIQNLWLNNQNDGFGFEGGIDVLSGMVHLNQVWLHKNKLTGSIPDLSNCSSLSDLQLRDNMLTGVVPESLMGMSSLKTVSLDNNMLQGPVPVFGKGVQVTLDGINSFCSTKPGEACDPMVNALLEVAMGFGYPVRLANSWQGNDPCNDWSFVVCAEGKIVTVNLEKQGLNGTISPAFANLTDLRNLYLSGNNLTGSIPDSLVSLAQLDVLDVSNNNLSGEIPKFGGRVKITSNGNALLVKPGGGGGGGSGTSPSANSGNAPGGSPSKMGNSSSLSPGWIAGIAIIAVFFVAVVLFVFCKCYAKNRHRKFGRVDNPEFRKGEVKIDVLSNSNGHGGVPSELQSQGSDRSDLPVFEGGNVAISFQVLRQVTDNFSEDNILGRGGFGVVYKGELHDGTKIAVKKMESVAMGSKKMNEFQAEIAVLTKVRHRHLVALLGYCINGNEGLLVYEYMPQGTLTQHLFDWHDNGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAALALALALALALALALALALALALALALALALALALALMFSPISVLVFSGVSDMSSVTNFSNVNSTFFTSITFLHFIKACRKILFIFACCLVMANVVFAELDYFDIESTGRVTTKVDVYAFGVVLMELITGRKALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLNPDEETMESIYKVAELAGHCTAREQYQRPDMGHAVNVLVPLVEQWKPSSSHGEEGDGIDLQMSLPQALRRWQANEGTSSMFNDMSFSQTQTSLPSRIADSFDSMDCRFNYYFLQNCNSLTTGTDRPNMCPYMENLGLGPNIHNTEGLFHNTSSSSSSSWYATNQFLLEVIFHNKMRKYECLTNDSSLANAIFVPYYAGLDVSQFLWVSNITIRDSSGKELLQWLSKRDEWKKMWGMDHFLVSGRISWDLRRQFDNESYWGSKFRFLPESMNMSMLAVEASSWKNDYAIPYPTSFHPSSESEVLQWQSKMRLQKRPYLFTFTGAPRPELKGSIRGRVIEQCLGSSACKFINCSYGSGEKCDDPVNVMKVFSNSVFCLQPPGDSYTRRSIFDSMLAGCVPVFFHPGTAYSQYKWFLPNNSTKYSVYIPVKDVKEWNVNVEKVLMGISQDEVVAMREEVINLIPNIIYANPKSKLDKIEDAFDLAVKGILERIEEVREAMKNGRDPSIGFADEDHYKYTFSDNHS 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1677 1445 PANTHER OSJNBA0070M12.3 PROTEIN 862 1030 - -
Lal17g1677 1445 PANTHER OSJNBA0070M12.3 PROTEIN 6 757 - -
Lal17g1677 1445 ProSiteProfiles Protein kinase domain profile. 578 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1677 1445 SUPERFAMILY L domain-like 35 300 - -
Lal17g1677 1445 SMART serkin_6 578 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1677 1445 ProSitePatterns Protein kinases ATP-binding region signature. 584 607 IPR017441 GO:0005524
Lal17g1677 1445 SUPERFAMILY Protein kinase-like (PK-like) 864 969 IPR011009 -
Lal17g1677 1445 MobiDBLite consensus disorder prediction 447 476 - -
Lal17g1677 1445 SMART LRR_typ_2 386 410 IPR003591 -
Lal17g1677 1445 SMART LRR_typ_2 108 131 IPR003591 -
Lal17g1677 1445 SMART LRR_typ_2 182 205 IPR003591 -
Lal17g1677 1445 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 862 1030 - -
Lal17g1677 1445 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 6 757 - -
Lal17g1677 1445 Pfam Leucine rich repeat 367 423 IPR001611 GO:0005515
Lal17g1677 1445 Gene3D Phosphorylase Kinase; domain 1 542 655 - -
Lal17g1677 1445 SUPERFAMILY Protein kinase-like (PK-like) 554 757 IPR011009 -
Lal17g1677 1445 MobiDBLite consensus disorder prediction 455 476 - -
Lal17g1677 1445 Gene3D Ribonuclease Inhibitor 23 318 IPR032675 -
Lal17g1677 1445 Pfam Exostosin family 1027 1363 IPR040911 -
Lal17g1677 1445 Pfam Protein kinase domain 579 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1677 1445 Pfam Leucine rich repeat N-terminal domain 327 360 IPR013210 -
Lal17g1677 1445 Pfam Leucine rich repeat N-terminal domain 25 59 IPR013210 -
Lal17g1677 1445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Lal17g1677 1445 Gene3D Ribonuclease Inhibitor 324 447 IPR032675 -
Lal17g1677 1445 ProSiteProfiles Leucine-rich repeat profile. 87 109 IPR001611 GO:0005515
Lal17g1677 1445 SUPERFAMILY L domain-like 341 430 - -
Lal17g1677 1445 Gene3D Transferase(Phosphotransferase) domain 1 847 980 - -
Lal17g1677 1445 Gene3D Transferase(Phosphotransferase) domain 1 656 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1677 Lal-Chr17 17944647 17950684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1677 840 961 Receptor kinase-like Gene Family AT5G07280 32.824 1.16e-07 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lal17g1677 Exostosin 2.2e-74 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1677 - - gmx:100783655 1029.62