Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1671 ATGAGTTTGGTCCATGTAGTTGGGTTTGGTTTAAAAGTGGGGCATCTACTTTTGGTGTTATGTTGCTGGATTGTGTCTATCATTTATCTGAATTGGTTAACTAAGGACACCCAGATGGGTTTTCTAGGGGGTAGTGGCAGCAAGATGTGGTGGGTGAAATGGTGGGAGAAGATCTTAGGGAATAGTGGTCTAAGTCACCAATACTATTACCAGTATATTGGGTCAAAGAAAGTGAGGAAAGCATTGTGGAAGAAGCTTTTGCTGATATGGGTAATTGCTTGGTGTATAGTGTGTTTGTGGATCTTGTGTTGCATGAGCTTACAAGTGATTGAGAAGAGGAAAGAAACATTGACAAGTATGTGTGATGAAAGGGCTAGGATGCTGCAGGACCAGTTCAATGTGAGTATGAACCATATCCAAGCCATGTCCATTCTAATCTCAACCTTTCACCATGCCAAGGACCCCTCTGCCATTGACCAGAAAACTTTTGCCAGGTACACAGAAAGAACTGCTTTTGAGAGGCCCCTTACAAGTGGTGTTGCATATGCAGTAAGGGTGCTCCATTCTGAGAGGGAACAATTTGAAAAGCAACAAGGGTGGACTATTAAGAGGATGGATAACTTGGAACAGAATCCAGTTCATAAGGATGAATATGCCCCTGAGTCATTGGAGCCATCCCCTATTAAGGAAGAATATGCTCCTGTCATCTTTGCACAGGATACAGTTTCACATGTCATTTCTCTTGATGTGCTTTCTGGAAAGGAAGACCGTGAAAATGTGTTACGTGCAAGAGAATCAGGCAAAGGGGTTTTAACTGCTCCCTTCAGGCTTCTCAAAACAAATCGTCTAGGGGTAATATTGACATTTGCTGTTTACAAGAAAGAACTTCCACCAAATGCAACCCCAAATGAAAGGATTCAAGCCACTAATGGGTATCTTGGTGGGGTTTTCGATATTGAGTCTTTAGTGGAGAAATTGCTTCAACAACTTGCTAGCAAGCAAACAGTAATTGTTAATGTTTATGATACTACAAATCATACCCATCCTATTCCCATGTATGGTTCAAATGTATCAGGTGATGGGTTATATCATATCAGTGCTCTTAGCTTTGGAGATCCTTTCAGGAAGCACGAGATGCATTGCAGGTTCAAACAGACACCACCATGGCCATGGTTGGCAATAACCACATCAATTGGAATCCTTGTTATTGCACTCCTTGTTGGACATATTTTTCATGCCACTGTGAATCGAATTGCAAAAGTGGAGGATGATTACCATGAGATGATGGAGCTTAAAAAACGAGCCGAGGCAGCTGATGTTGCAAAATCCCAGTTCCTTGCTACTGTTTCCCATGAGATCAGAACACCAATGAATGGTGTGTTAGGTATGATGAACATGCTTATGGACACAGATCTAGATGTAACACAACAGGAATATGTTAGAACGGCACAGGGAAGTGGAAAAGCGTTGGTGTCAATTATAAATGAGGTTTTGGACCAGGCAAAGATTGAATCTGGCAAGCTAGAGCTCGAGGCAGTGTTGTTTGATATAAGAGCAATTTTGGATGATGTGTTGTCACTATTTTCTGAGAAGTCTCAAGCAAAAGGAATAGAGTTGGCAGTTTATGTGTCAGATCGAGTTCCTGAACAGCTAATAGGCGATCCGGGACGGTTTCGGCAAATACTTACGAATCTCATGGGTAACTCTATCAAGTTCACAGACAAAGGGCATATCTTTATCACTATCCATGTAGTTGAGGAGGTTATCCACTCAATAGAAGTTGACAAAGAATTAACTTCAAATGATACCCTAAGTGGTTTCGCCGTTGCTGATAGTCGCCGGAGCTGGGAAGGATTTGAGGCTTTCAGTCAAGAGGGACCATTTGGTTCTTCGTCATCAACCTCAAGTGATCTCATCAATTTGATTGTATCTGTTGAGGATACAGGTGAAGGAATTCCTCTAGAATCACAGTCACTCATCTTCACTCCATTCATGCAGGTCGGTCCATCGATCTATCGAAAACATGGGGGAACAGGCATTGGTCTAAGCATTAGCAAGTGTTTGGTTAGGCTAATGAATGGAGAAATTGGATTTGTGAGTGAACCTAAGATTGGGTCCACTTTCACATTTACTGCTGTGTTCACCAATGGATGTCCTAATTCAAGTGAGTGTAAAACCCAGCAAATCAATAACCAATCTCACACTGCATCCTCAGAATTTCAAGGCATGGTTGCATTAGTTATTGATCCCCGACCGGTTCGAGCTGAAGTGTCAAGATATCATGTTCAGAGACTTGGCATTCATGTTGAATTAGTTTCAGATTTATATCAAGGTTTGTCCACCATAGGCAATGGCAATGTATGTATCAATATGGTCCTGATTGAACAGGAGATATGGGATAGGGATTCAGTCATTTCGACTGACTTTGTCAATAGTGCTAGTAAAGTTGACCGTGGTGGTGTTCCTCCTCCAAAACTATTCATTCTTGTCAATTCTAGCAGTTCTATAACATCAGGTGTTCATAATCCAACTGTCATCATAAAACCTTTAAGAGCAAGTATGCTTGCTGCTTCGCTACAACGAGCCATGGGCGTTGGGAACAAGAGGAATCTTCAAACATTATCTCTTCACCATCTTCTTCTTGGCAGGAAAATTCTAATTGTAGATGACAATAGTGTGAACCGCACCGTAGCGGCTGGTGCTTTGAAAAAGTATGGAGCTAGTGTGGTTTGTGCAAGCAGTGGAAAAGATGGCATCTCTTTGCTGAAGCCACCCCATCAGTTTGATGCCTGTTTCATGGATATTCAAATGCCAGAAATGGATGGGTACGTAACTGTTATACCTTCTTCTAAATCTTTACAAGTATGTTTTGAGGCTACAATGAGAATTAGGGAGATGGAACGTGGTGTGAACAGAGAAATGTCTGTGGAAGCCTCTGAGAATAGTTCAAAATGGCATATACCAATTTTGGCTATGACTGCAGATGTGATCCAAGCTACACATGAGGTATGCCTAAACTGTGGCATGGATGGATATGTTTCAAAACCATTTGAAGCTGAACAGCTTTATAGAGAAGTTTCGCGGTTTTTCCAATCATCTTGA 3102 0.4165 MSLVHVVGFGLKVGHLLLVLCCWIVSIIYLNWLTKDTQMGFLGGSGSKMWWVKWWEKILGNSGLSHQYYYQYIGSKKVRKALWKKLLLIWVIAWCIVCLWILCCMSLQVIEKRKETLTSMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKDPSAIDQKTFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDNLEQNPVHKDEYAPESLEPSPIKEEYAPVIFAQDTVSHVISLDVLSGKEDRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKKELPPNATPNERIQATNGYLGGVFDIESLVEKLLQQLASKQTVIVNVYDTTNHTHPIPMYGSNVSGDGLYHISALSFGDPFRKHEMHCRFKQTPPWPWLAITTSIGILVIALLVGHIFHATVNRIAKVEDDYHEMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMMNMLMDTDLDVTQQEYVRTAQGSGKALVSIINEVLDQAKIESGKLELEAVLFDIRAILDDVLSLFSEKSQAKGIELAVYVSDRVPEQLIGDPGRFRQILTNLMGNSIKFTDKGHIFITIHVVEEVIHSIEVDKELTSNDTLSGFAVADSRRSWEGFEAFSQEGPFGSSSSTSSDLINLIVSVEDTGEGIPLESQSLIFTPFMQVGPSIYRKHGGTGIGLSISKCLVRLMNGEIGFVSEPKIGSTFTFTAVFTNGCPNSSECKTQQINNQSHTASSEFQGMVALVIDPRPVRAEVSRYHVQRLGIHVELVSDLYQGLSTIGNGNVCINMVLIEQEIWDRDSVISTDFVNSASKVDRGGVPPPKLFILVNSSSSITSGVHNPTVIIKPLRASMLAASLQRAMGVGNKRNLQTLSLHHLLLGRKILIVDDNSVNRTVAAGALKKYGASVVCASSGKDGISLLKPPHQFDACFMDIQMPEMDGYVTVIPSSKSLQVCFEATMRIREMERGVNREMSVEASENSSKWHIPILAMTADVIQATHEVCLNCGMDGYVSKPFEAEQLYREVSRFFQSS 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1671 1033 CDD REC_hyHK_CKI1_RcsC-like 885 1026 - -
Lal17g1671 1033 CDD PRTases_typeI 842 912 IPR000836 -
Lal17g1671 1033 ProSiteProfiles Histidine kinase domain profile. 448 716 IPR005467 -
Lal17g1671 1033 ProSiteProfiles CHASE domain profile. 154 380 IPR006189 -
Lal17g1671 1033 Coils Coil 418 438 - -
Lal17g1671 1033 Pfam His Kinase A (phospho-acceptor) domain 441 506 IPR003661 GO:0000155|GO:0007165
Lal17g1671 1033 PANTHER HISTIDINE KINASE 3 55 1032 - -
Lal17g1671 1033 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 495 711 IPR036890 -
Lal17g1671 1033 SMART CHASE_2 154 355 IPR006189 -
Lal17g1671 1033 Pfam Response regulator receiver domain 885 943 IPR001789 GO:0000160
Lal17g1671 1033 SMART REC_2 883 1026 IPR001789 GO:0000160
Lal17g1671 1033 SMART HisKA_10 441 506 IPR003661 GO:0000155|GO:0007165
Lal17g1671 1033 Pfam CHASE domain 157 353 IPR006189 -
Lal17g1671 1033 Gene3D CHASE domain 158 387 IPR042240 -
Lal17g1671 1033 SUPERFAMILY CheY-like 882 1030 IPR011006 -
Lal17g1671 1033 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 714 IPR003594 -
Lal17g1671 1033 CDD HATPase_EvgS-ArcB-TorS-like 558 714 - -
Lal17g1671 1033 Gene3D - 505 716 IPR036890 -
Lal17g1671 1033 PRINTS Bacterial sensor protein C-terminal signature 641 655 IPR004358 GO:0016310|GO:0016772
Lal17g1671 1033 PRINTS Bacterial sensor protein C-terminal signature 659 669 IPR004358 GO:0016310|GO:0016772
Lal17g1671 1033 PRINTS Bacterial sensor protein C-terminal signature 676 694 IPR004358 GO:0016310|GO:0016772
Lal17g1671 1033 PRINTS Bacterial sensor protein C-terminal signature 700 713 IPR004358 GO:0016310|GO:0016772
Lal17g1671 1033 ProSiteProfiles Response regulatory domain profile. 884 1030 IPR001789 GO:0000160
Lal17g1671 1033 SUPERFAMILY CheY-like 740 864 IPR011006 -
Lal17g1671 1033 PANTHER TWO-COMPONENT HISTIDINE KINASE 55 1032 - -
Lal17g1671 1033 Gene3D - 105 157 - -
Lal17g1671 1033 ProSiteProfiles Response regulatory domain profile. 744 863 IPR001789 GO:0000160
Lal17g1671 1033 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 426 507 IPR036097 GO:0000155|GO:0007165
Lal17g1671 1033 Gene3D - 880 1033 - -
Lal17g1671 1033 Gene3D - 409 504 - -
Lal17g1671 1033 CDD HisKA 441 502 IPR003661 GO:0000155|GO:0007165
Lal17g1671 1033 SMART HKATPase_4 553 716 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1671 Lal-Chr17 17913810 17922428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1671 1 1032 Miscellaneous Gene Families AT1G27320 66.573 0.0 1374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal17g1671 CHASE 2.3e-38 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1671 K14489 - gmx:100776798 1631.69