Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1665 ATGATCGTGGCGATGGCGGAGGAAGAAGAAAACGAGAATTCAACCCGACCCGAGTTACCAACGGGTCGGATCAAGAGAATAATGAGACTAGACAACGAAGTGAATCGTGTCAGCGGAGAAGCGTTGTTGTTGGTAACGCGATCGACGGAGTTGTTCCTCCAATTTCTAGCTGACAAGTCCGCGCGTGTGGCGATTGAGAAGAAACGCAAGATCGTGAAGCTTGAACACTTAACAATTGCCGTTAAGAGGCACCAGCCTACCAGTGATTTTCTCCTCGATTCGCTTCCGCGAGCCGAAGAGAAAATTGTTCCTCCCTCCAATCGGACCAGTAAACCTGATAATCCCCCTCCGCCTTCTAATCGCCGTATTGATCAATTTTTCAAAAAACAAGTAACCGAACCTGATTCTGATGCTGATGTTGTGGCCGAACCTGAAACTGAACCTGAACCTGAAGCAGAATTGGAGGCTGAAGCGCCAGTACCAATAGATGAGTGTTAG 498 0.4819 MIVAMAEEEENENSTRPELPTGRIKRIMRLDNEVNRVSGEALLLVTRSTELFLQFLADKSARVAIEKKRKIVKLEHLTIAVKRHQPTSDFLLDSLPRAEEKIVPPSNRTSKPDNPPPPSNRRIDQFFKKQVTEPDSDADVVAEPETEPEPEAELEAEAPVPIDEC 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1665 165 SUPERFAMILY Histone-fold 18 113 IPR009072 GO:0046982
Lal17g1665 165 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 6 130 - -
Lal17g1665 165 MobiDBLite consensus disorder prediction 138 165 - -
Lal17g1665 165 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 6 130 - -
Lal17g1665 165 Gene3D Histone, subunit A 2 97 IPR009072 GO:0046982
Lal17g1665 165 MobiDBLite consensus disorder prediction 91 165 - -
Lal17g1665 165 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 18 81 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1665 9 136 CCAAT-HAP5 Transcription Factor Family AT5G43250 56.250 1.25e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lal17g1665 CBFD_NFYB_HMF 1.8e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1665 - - lang:109328654 260.766