Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1658 ATGTACTCATTAGAGAAGCCACGCCCCATTGATTTCTACAAAGAAGAAGAAGAAACCCCAGAAATGATGATCGAAGTGGTCCCCACCACCGACAACAACAGCAACAATCACCACCTCCAACAACCACCGCCACCACCACCACCGTTAATCCTCACCGAGAGCAGCGGCGACGACCCAGAACTGGACCAAATCAAAGCCCCCAAAAAACGCGCTGAGACATGGGTCCAAGACGAGACGCGTAACCTAATATCCCTTCGTCGTGAGATGGACGCGCTTTTCAACACCTCCAAATCGAACAAGCATCTTTGGGAGCAGATTTCGGCGAAGATGAGGGACAAGGGTTTCGATCGTTCTCCAACTATGTGCACTGATAAATGGAGGAACTTGCTTAAGGAGTTTAAGAAAGCAAAGCACCAAGATAATAGAGGAAGTAGTAAAATGAGTTATTATAAAGAGATTGATGAGATTTTGAGAGAGAGGAGTTGTAAAAGTGTGCATTATAAGACACCTACTCCTCCAACCCTTTCTAAAGTTGATTCCTTTATGCATTTTGCTGACAAAGGTATTGAGGATACTAGCATATCTTTTGGGCCTGTTGAAGCTAATGGGAGACCAACACTCAATCTGGAGAGAAGTTTGGATCATGATGGGCATCCTCTTGCCATTACCACAGCGGACGCTGTTGCAGCAAGTGGAGTCCCGCCTTGGAATTGGAGAGAAACTCCTGAGAATGGAGGTGGGGAGAGTCAGTCATGTTGTGGAAGGGTTATATCGGTGAAATGGGGTGATTATACAAGGCGTATTGGTATTGATGGCGCTGCAGAAGCCATCAAGGAGGCAATTAGGTCTGCTTTTAGATTGAGAACTAGACGTGCATTTTGGTTGGAGGATGAAGAACAAATTATCAGAAGTATTGACCGTGACATGCCCTTAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCTGTTAAAGTATGCCTCTATGATGAGTCTGACCATATCTCTGTGCACACTGAAGAGAAGATTTTCTACACTGAAGATGATTACCGTGATTTTCTGACGCGCCGAGGTTGGACATGTCTAAGGGAGTTTGATGGCTATAGAAATATTGACAATATGGATGATCTTCGACCTGGTGCCATATATCGTGGTGTGAGTTGA 1164 0.4502 MYSLEKPRPIDFYKEEEETPEMMIEVVPTTDNNSNNHHLQQPPPPPPPLILTESSGDDPELDQIKAPKKRAETWVQDETRNLISLRREMDALFNTSKSNKHLWEQISAKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDNRGSSKMSYYKEIDEILRERSCKSVHYKTPTPPTLSKVDSFMHFADKGIEDTSISFGPVEANGRPTLNLERSLDHDGHPLAITTADAVAASGVPPWNWRETPENGGGESQSCCGRVISVKWGDYTRRIGIDGAAEAIKEAIRSAFRLRTRRAFWLEDEEQIIRSIDRDMPLGNYTLHLDEGMAVKVCLYDESDHISVHTEEKIFYTEDDYRDFLTRRGWTCLREFDGYRNIDNMDDLRPGAIYRGVS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1658 387 Coils Coil 75 95 - -
Lal17g1658 387 CDD GT1 72 137 - -
Lal17g1658 387 PANTHER - 5 386 - -
Lal17g1658 387 Gene3D - 74 136 - -
Lal17g1658 387 ProSiteProfiles Myb-like domain profile. 66 130 IPR001005 -
Lal17g1658 387 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 386 - -
Lal17g1658 387 MobiDBLite consensus disorder prediction 1 60 - -
Lal17g1658 387 Pfam Myb/SANT-like DNA-binding domain 73 156 IPR044822 -
Lal17g1658 387 SMART sant 70 132 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1658 Lal-Chr17 17833904 17838652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1658 46 386 Trihelix Transcription Factor Family AT3G25990 72.414 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal17g1658 Myb_DNA-bind_4 1.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1658 - - ccaj:109807736 639.032