Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1645 ATGGACTACGCTACAGAATTTCCTCACTCTTCAATGGATCGCCGTCCTCGTAAAAAACCTAAATTGGCTTGGGATCTTCATCAATCCAACTCAAAGGCTCATTCGGGAATTTATTATGGGCAAGAGGTTGCAAATGTGACAAGCTTTGAAACGCCGAGGGTGCTTCCTGAACATGCTGGTCTTTTTGTAAAAGGATTGGCTGAAAAAGGTTCTCCCCAATGGCGAGATGATGATAAAGATGGGCATTATGTGTTTGCACTCGGAGACAATTTAACTTCTCGATATAAGATCCTCAGGAAAATCGGTGAAGGGACTTTTGGTCAGGTTTTGGAATGTTGGGATAGAGAAACAAGGGAGCTGGTTGCCATTAAAGTTGTGCGGAGTATTAAGAAATACCGCGAAGCAGCTATGGTAGAAGTTGATGTGCTCCATTTGCTTGGGAGGTATGACAGGAATGGCAGCCGCTGTGTTCAAATACGGAACTGGTTTGACTACCGTAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTTCGGAAGAACAATTATGGTCCATTTCCGGTTGATCTTGTCCTCATGCATGATTTGCGCCTCATCCACACAGACTTGAAGCCCGAAAATATACTTTTTATTTCCTCAGAATATGTAAAAGTGCCCGACTACAAGGTTACATTCCGGTCTCCAAAAGAGGGAACCTCTTTTAAGAGACTGCCAAAGTCAAGTGCTATCAAGGTTATTGATTTTGGTAGCACAGCCTATGAGCACCAAGATCACAACTATATTGTTTCTACTAGGCATTATCGAGCACCTGAGGTTATTCTTGGACTAGGGTGGAACTTTCCTTGTGACATATGGAGTGTTGGCTGCATTTTAATTGAGTTGTGCTCGGGAGAAGCTTTGTTTCAGACGCATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTTTTAGGCCCATTACCTCAGCACATGTTAAAAAGAGCAGACCGGCAGGCAGAGAAGTATGTCCGAAGGGGTAGACTGAACTGGCCAGAAGGAGCAGTCTCTCGAGAGAGTATCAAGGCTGTATTGAAACTACCTCGTCTTCCTAATCTGGTGATGCAGCACGTGGATCACTCTGCCGGGGATCTCCTCGATCTCTTGCAGGGCCTACTTCGATTTGACCCCTCCAGTAGACTGAAAGCTCATGAAGCACTCAGGCATCCCTTCTTCACTGGGGAGCGTTACCAGAGATTAAGATAG 1260 0.4468 MDYATEFPHSSMDRRPRKKPKLAWDLHQSNSKAHSGIYYGQEVANVTSFETPRVLPEHAGLFVKGLAEKGSPQWRDDDKDGHYVFALGDNLTSRYKILRKIGEGTFGQVLECWDRETRELVAIKVVRSIKKYREAAMVEVDVLHLLGRYDRNGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYGPFPVDLVLMHDLRLIHTDLKPENILFISSEYVKVPDYKVTFRSPKEGTSFKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWNFPCDIWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPQHMLKRADRQAEKYVRRGRLNWPEGAVSRESIKAVLKLPRLPNLVMQHVDHSAGDLLDLLQGLLRFDPSSRLKAHEALRHPFFTGERYQRLR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1645 419 SUPERFAMILY Protein kinase-like (PK-like) 82 415 IPR011009 -
Lal17g1645 419 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 417 - -
Lal17g1645 419 ProSiteProfiles Protein kinase domain profile. 95 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1645 419 MobiDBLite consensus disorder prediction 1 20 - -
Lal17g1645 419 Gene3D Transferase(Phosphotransferase) domain 1 174 417 - -
Lal17g1645 419 Gene3D Phosphorylase Kinase; domain 1 68 173 - -
Lal17g1645 419 CDD PKc_CLK 82 410 - -
Lal17g1645 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lal17g1645 419 Pfam Protein kinase domain 95 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1645 419 ProSitePatterns Protein kinases ATP-binding region signature. 101 131 IPR017441 GO:0005524
Lal17g1645 419 SMART serkin_6 95 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1645 419 PANTHER KINASE AFC1 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1645 Lal-Chr17 17748826 17752938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1645 80 412 MAP Kinase Gene Family AT3G59790 26.836 2.01e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lal17g1645 Pkinase 2.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1645 K08287 - qsu:112037155 735.332