Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal17g1635 | ATGGCTATTACACCTTTTGGTATCACATTTTCTACTCAATGGGGAATTCCTCCTCATATTTTCACCAAATCCAGTATCATGGCCAAGGTTGCATCATCATCTTCCACCCAAAATAAATACTTAAGTTCTCTTCCCTGCAGTGTTACAAGCAGGACGGGGTTTATGGCTGCCTCAAGTTCGAGCTTTTTTTCCGGGGATTCCTTGCGTGCACTATACAACATGGGTTCATCTCCATCTTTGCATCACCGCAGGGGATCGATGTTGATAGTTAGAGCAGATGCAGATTACTATTCTGTCCTTGGAGTGTCAAAAAATTCTAGCAAATCCGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGAAATTATCATCCAGATGTGAACAAAGAACCTGGTGCAGAACAGAAGTTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGATGATGAAAAGCGATCCATATATGACACTTATGGAGAGGCTGGGCTTAAAGGTTCAGCAGGAATGGGGGGCATGGGGGATTTCAACAATCCCTTTGACCTGTTTGAGACATTGTTTGAGGGCATGAATAGTGGTGGCAGGAACTCCAGAGGTTCTAGGAATGGAGCAGTTGAAGGTGAAGATGAGTATTACAGTCTAGTTTTAAACTTCAAAGAAGCAGTTTTTGGAGTAGAGAAGGAGATAGAGATTAGACGATTGGAGAGCTGTGGAACTTGCAATGGTACAGGGGCTAAACCAGGGACTAAGTCATCCAGATGTAGCACTTGTGCAGGTCAAGGTCGTGTTGTCTCACAAACAAGGACTCCACTAGGTATCTTTCAGCAGACTATGACCTGCTCTTCCTGCAATGGGACTGGAGAAACTTCCACACCTTGCAATACATGTTCCGGGGATGGTCGAGTCAGGAGAACAAAGCGGATAAGTCTCAAGGTTCCAGCTGGAGTGGATTCTGGTAGTCGATTAAGGGTCCAAAATGAAGGAAATGCTGGAAGGCGTGGAGGTCCTCCAGGCGATCTCTTTGTTATCCTTGAAGTTATCCCCGACCCTGTCCTTAAACGTGACGACACCAACATTTTATGCACCTGTAAGGTTTCTTATATTGATGCAATCTTGGGGACTACAACTAAGGTTCCTACTGTAGATGGCATGGTAGACTTAAAAATCCCGGCTGGGACTCAACCAGGCTCGACACTTGTTATGGCTAGGAAAGGTGTTCCCCGGCTGAATAAAAGCAACATGCGGGGTGATCAATTGGTCCGTGTGCAAGTTGAAATCCCTAAAAGATTGAGCGCCGATGAGAGAAAACTTATTGAAGAACTTGCTGATTTAAGCAAAGGCAAGACTGCCACAACAAGTAGATGA | 1362 | 0.4471 | MAITPFGITFSTQWGIPPHIFTKSSIMAKVASSSSTQNKYLSSLPCSVTSRTGFMAASSSSFFSGDSLRALYNMGSSPSLHHRRGSMLIVRADADYYSVLGVSKNSSKSEIKSAYRKLARNYHPDVNKEPGAEQKFKDISNAYEVLSDDEKRSIYDTYGEAGLKGSAGMGGMGDFNNPFDLFETLFEGMNSGGRNSRGSRNGAVEGEDEYYSLVLNFKEAVFGVEKEIEIRRLESCGTCNGTGAKPGTKSSRCSTCAGQGRVVSQTRTPLGIFQQTMTCSSCNGTGETSTPCNTCSGDGRVRRTKRISLKVPAGVDSGSRLRVQNEGNAGRRGGPPGDLFVILEVIPDPVLKRDDTNILCTCKVSYIDAILGTTTKVPTVDGMVDLKIPAGTQPGSTLVMARKGVPRLNKSNMRGDQLVRVQVEIPKRLSADERKLIEELADLSKGKTATTSR | 453 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal17g1635 | 453 | TIGRFAM | DnaJ_bact: chaperone protein DnaJ | 95 | 442 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
Lal17g1635 | 453 | Hamap | Chaperone protein DnaJ [dnaJ]. | 92 | 449 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
Lal17g1635 | 453 | CDD | DnaJ_C | 207 | 429 | - | - | |
Lal17g1635 | 453 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 204 | 359 | IPR008971 | GO:0006457|GO:0051082 | |
Lal17g1635 | 453 | Pfam | DnaJ central domain | 236 | 299 | IPR001305 | GO:0031072|GO:0051082 | |
Lal17g1635 | 453 | Gene3D | DnaJ domain | 92 | 199 | IPR036869 | - | |
Lal17g1635 | 453 | CDD | DnaJ | 95 | 148 | IPR001623 | - | |
Lal17g1635 | 453 | Gene3D | - | 236 | 299 | - | - | |
Lal17g1635 | 453 | Gene3D | - | 206 | 341 | - | - | |
Lal17g1635 | 453 | PANTHER | BNAA01G34580D PROTEIN | 39 | 452 | - | - | |
Lal17g1635 | 453 | ProSitePatterns | Nt-dnaJ domain signature. | 136 | 155 | IPR018253 | - | |
Lal17g1635 | 453 | Pfam | DnaJ domain | 95 | 156 | IPR001623 | - | |
Lal17g1635 | 453 | PRINTS | DnaJ domain signature | 97 | 115 | IPR001623 | - | |
Lal17g1635 | 453 | PRINTS | DnaJ domain signature | 115 | 130 | IPR001623 | - | |
Lal17g1635 | 453 | PRINTS | DnaJ domain signature | 131 | 151 | IPR001623 | - | |
Lal17g1635 | 453 | PRINTS | DnaJ domain signature | 151 | 170 | IPR001623 | - | |
Lal17g1635 | 453 | SUPERFAMILY | Chaperone J-domain | 91 | 190 | IPR036869 | - | |
Lal17g1635 | 453 | ProSiteProfiles | dnaJ domain profile. | 95 | 159 | IPR001623 | - | |
Lal17g1635 | 453 | SMART | dnaj_3 | 94 | 151 | IPR001623 | - | |
Lal17g1635 | 453 | Pfam | DnaJ C terminal domain | 211 | 426 | IPR002939 | - | |
Lal17g1635 | 453 | ProSiteProfiles | Zinc finger CR-type profile. | 223 | 304 | IPR001305 | GO:0031072|GO:0051082 | |
Lal17g1635 | 453 | PANTHER | DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED | 39 | 452 | - | - | |
Lal17g1635 | 453 | CDD | DnaJ_zf | 236 | 299 | IPR001305 | GO:0031072|GO:0051082 | |
Lal17g1635 | 453 | SUPERFAMILY | DnaJ/Hsp40 cysteine-rich domain | 223 | 302 | IPR036410 | - | |
Lal17g1635 | 453 | Gene3D | - | 346 | 452 | - | - | |
Lal17g1635 | 453 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 351 | 437 | IPR008971 | GO:0006457|GO:0051082 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal17g1635 | Lal-Chr17 | 17679843 | 17683474 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal17g1635 | 96 | 158 | C2H2 Transcription Factor Family | AT1G74250 | 44.928 | 6.45e-10 | 59.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal17g1635 | K03686 | - | gmx:100786143 | 698.738 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal4g1621 | 4 | 20376937 | 20381355 | Lal17g1635 | 17 | 17679843 | 17683474 | LSH |