Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1627 ATGTGTGGAATCCTTGCAGTGTTGGGTTGTGTTGATAACTCTCAGGCAAAACGTTCCCGTATCGTCGAGTTATCTCGCAGGTTGAGACATAGAGGTCCTGATTGGAGTGGGTTGCATTGTCATGAGGATTGTTATCTTGCTCATCAAAGGCTTGCTATTGTTGATCCTACTTCAGGAGATCAACCTCTTTACAATGAAGACAAGACTGTTATTGTTACTGTGAATGGGGAGATATATAACCATAAGCAATTAAAACAGAAACTGAGTTCCCATCAATTTCGAACCGGGAGTGACTGTGAAGTGATGGCTCATCTTTACGAAGAACATGGAGAAGATTTCATTGATATGCTGGATGGGATGTTCTCCTTTGTACTTCTTGACACTCGAGATAAAAGTTTCATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTACATGGGCTGGGGCCTTGATGGATCGATATGGTTTGCATCTGAAATGAAAGCTTTGAGTGATGATTGTGAAAGATTCATATCTTTTCCTCCCGGACATATATATTCCAGCAAAGAGGGTGGATTAAGAAGGTGGTACAACCCACCATGGTTCTCAGAGCAGATTCCGTCAACACCTTATGATCCAATCATTTTACGTGAGACATTTGAGAAGGCTGTAGTGAAGAGACTTCTGGACTCGTCACTTGTTGCTGCCGTGGCCAACCGTCATTTGGCTGAATCTGCAATTGCTCAACATTGGGGATCCCAGTTACACACTTTCTGCATTGGTTTAAAGGGCTCTCCAGATTTGAAAGCTGCCAAAGAGGTAGCAGATTATCTTGGTACTCGTCACCATGAACTTCATTTCACGGTCCAGGTCAATATCTCTCATCATTTCTCTTTCCCTTTTTTTTGCTTAAACATGAGACTTTTAGTGCTACCCAGAAGCAGTTTTTTTAAATTTCTGCTATATCAAGAAGGTATAGATGCGCTTGAAGAAGTCATTTACCATATTGAAACATATGATGTAACGACTGTCAGAGCAAGTACTCCAATGTTTCTTATGTCTAGAAAAATCAAATCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCACAAGGCACCTAACAAGGAAGAGCTTCATGAAGAAACATGTCGAAAAATTAAAGCTCTTCATCTTTATGACTGCCTAAGAGCCAATAAATCAACTTCAGCGTGGGGTATGGAGGCACGTGTACCGTTCCTGGATAAAGACTTTATCAACACAGCCATGAGTATTGATCCAGAGTGGAAAATGATAAAGCCTGATCTTGGAAGGATAGAGAAGTGGGTTTTACGTAATGCATTTGATGATGAAAAGAATCCCTATTTACCAATGCACATATTGTACAGGCAGAAAGAACAGTTTAGTGATGGTGTTGGGTACAGCTGGATTGACGGTTTGAAGGAACATGCTAACAAACAAGTTACAGATGGAATGCTGATGCATGCTAACTATATTTACCCGGAAAACACTCCTACTACTAAAGAGGCATACCACTACAGGACAATTTTTGAGAAGTTCTTCCCAAAGAATGCTGCAAGGTCAACAGTTCCAGGGGGTCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAATGGGATGCAGCATGGTCTAAAAATCTCGACCCTTCTGGTCGTGCCGCTCTTGGTGTTCATGAAGCTGCATATGAGGATGCAGTGGATACCAAAATTGCTGAGCCTGAAAATTGA 1764 0.4172 MCGILAVLGCVDNSQAKRSRIVELSRRLRHRGPDWSGLHCHEDCYLAHQRLAIVDPTSGDQPLYNEDKTVIVTVNGEIYNHKQLKQKLSSHQFRTGSDCEVMAHLYEEHGEDFIDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKEGGLRRWYNPPWFSEQIPSTPYDPIILRETFEKAVVKRLLDSSLVAAVANRHLAESAIAQHWGSQLHTFCIGLKGSPDLKAAKEVADYLGTRHHELHFTVQVNISHHFSFPFFCLNMRLLVLPRSSFFKFLLYQEGIDALEEVIYHIETYDVTTVRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEELHEETCRKIKALHLYDCLRANKSTSAWGMEARVPFLDKDFINTAMSIDPEWKMIKPDLGRIEKWVLRNAFDDEKNPYLPMHILYRQKEQFSDGVGYSWIDGLKEHANKQVTDGMLMHANYIYPENTPTTKEAYHYRTIFEKFFPKNAARSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHEAAYEDAVDTKIAEPEN 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1627 587 PIRSF Asn_synthetase_glu-h 376 536 IPR006426 GO:0004066|GO:0006529
Lal17g1627 587 PIRSF Asn_synthetase_glu-h 313 381 IPR006426 GO:0004066|GO:0006529
Lal17g1627 587 PIRSF Asn_synthetase_glu-h 1 292 IPR006426 GO:0004066|GO:0006529
Lal17g1627 587 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Lal17g1627 587 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 315 578 - -
Lal17g1627 587 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 287 - -
Lal17g1627 587 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Lal17g1627 587 Gene3D HUPs 195 534 IPR014729 -
Lal17g1627 587 Pfam Asparagine synthase 223 288 IPR001962 GO:0004066|GO:0006529
Lal17g1627 587 Pfam Asparagine synthase 317 531 IPR001962 GO:0004066|GO:0006529
Lal17g1627 587 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 188 521 - -
Lal17g1627 587 CDD Asn_Synthase_B_C 211 476 IPR001962 GO:0004066|GO:0006529
Lal17g1627 587 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Lal17g1627 587 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Lal17g1627 587 PANTHER ASPARAGINE SYNTHETASE 1 287 - -
Lal17g1627 587 PANTHER ASPARAGINE SYNTHETASE 315 578 - -
Lal17g1627 587 CDD AsnB 2 192 IPR033738 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1627 Lal-Chr17 17629712 17636378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1627 61 164 PRT Gene Family AT4G38880 37.069 6.85e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1627 K01953 - rcu:8269062 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0693 3 5570397 5576066 Lal17g1627 17 17629712 17636378 LSH