Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1624 ATGGTGGACGTAACAAGCATGGCCGTGGCCACGTCAAGTTCGTTCGTTGCTCCAACTGTGGCAAATGCTGCCCCAAGTAATGATCACATAGATAAGTCGATTAAGCGATTTGTGGTGAGAAACATTGTTGAGCAAGCTGCAGTTAGAGATGTTCAGGAGGCCTGTGTCTATGAGCAATACACTCTTCCAAAGCTGTATGTGAAGTTGCAGTACTGTGTTTCCTGTGCTATTCACTCTCATGTTGTGAGAGTTCGTTCGCGCACTGATAGGAGGAAGCGTGACCCCCCTCAGCGCTTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAGCCAGGTCAGGCACCTCGTCCTGCTGGAGCAGCTGCTCCTCCCCGTGCCTAA 384 0.5208 MVDVTSMAVATSSSFVAPTVANAAPSNDHIDKSIKRFVVRNIVEQAAVRDVQEACVYEQYTLPKLYVKLQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGAAAPPRA 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1624 127 Pfam Ribosomal protein S26e 31 104 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal17g1624 127 ProSitePatterns Ribosomal protein S26e signature. 71 78 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal17g1624 127 MobiDBLite consensus disorder prediction 84 127 - -
Lal17g1624 127 MobiDBLite consensus disorder prediction 88 108 - -
Lal17g1624 127 Gene3D Ribosomal protein S26e 19 112 IPR038551 -
Lal17g1624 127 PANTHER 40S RIBOSOMAL PROTEIN S26 30 126 - -
Lal17g1624 127 PANTHER 40S RIBOSOMAL PROTEIN S26 30 126 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal17g1624 127 MobiDBLite consensus disorder prediction 111 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1624 Lal-Chr17 17605210 17607379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1624 31 114 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 80.952 3.34e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1624 K02976 - gmx:100781822 141.354