Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1613 ATGGCTTCTTCAAGAGACATGGAAACTTGCAAATCTGAGCATATGCAAGTAGACATTGATCAGAAGAACTCATTCCAGGACAAAATTGTGAGGTCTCAGTGGGTACTAAATGCTCCTGAGCCCCCAAGTCCTTTACATGTTGTTGCAGATTCTGTGAAAAAAACTATCTCTAGGGTTAGAAAAAGGTTTTCCTCTATGGCAGATCAATCTTGCACCACACTTCTGCTTTCAGTTTTGCAAGGAATTTTTCCTATTCTTGGTTGGGGCAGAAGTTACACTGTAGCTAAATTCAGGAAAGATTTCCTTGCTGGACTTACTATTGCAAGTCTTTGTATTCCTCAGAGCATTGGATATGCAACCTTAGCACACCTTGATCCTGAATATGGCCTTTATACAAGTGTTGTGCCACCACTTATCTATGCTGTAATGGGAACTTCAAGAGAGATAGCAATTGGTCCTGTAGCAGTTGTTTCATTGCTTTTATCATCAATGGTTCAGAAATTAGTAGACCCTACCACTAATCCACTGGCTTATACAAAGCTCATTTTGCTTGCTACTCTATTTGCTGGCATCTTTCAAACTGCATTTGGATTCTTCAGGTTGGGTTTCCTTGTGGATTTCCTATCCCATGCTGCTATAGTTGGATTTGTGGCTGGAGCAGCCATTGTGATTGGCCTTCAACAATTGAAAGGATTGTTAGGAATCACTCATTTTACAACCAAAACTGACATAATCTCTGTCATGAAGGCTGTCTGGGAATCATTTCATGATCCTTGGAATCCTCGTAATTTTATCCTCGGATGCTCCTTCTTGGTGTTCATACTAACAACTAGAATTCTGGGTAAGAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATCTCTCCACTTGTATCTATTATAGTGTCAACTCTAGTTGTTTATCTGACCCAAGCTGATAAAGATGGAGTTAAAATTGTGAAACATGTCAAAGGAGGATTAAATCCAAGCTCTATTCATCAGTTAGATTTCAACAATCCCTATGTTGGAGAAGTTGCCAAAATTGGACTAGTGGTTGCTATTGTTGCCCTCACTGAATCAGTTTCTGTTGGACGATCATTTGCATCAATAAAAGGATACCAACTTGAAGGGAACAGGGAAATGGTGTCAATAGGTTTAACCAATATCATTGGATCTTTCACATCCTGCTATGTTGCTACTGGTTCATTCTCCCGCACTGCAGTTAATTATGCAGCTGGTTGTGAAACTTTAGTATCAAACATTGTGATGGCCATCACAGTTCTAATATCACTGCAGTTTTTGACAAAGCTCTTGTATTATACTCCAACTGCAATTATTGCTTCAATAATCCTCTCTGCTCTCCCAGGACTCATAGATATCAATGAAGCTTACAAAATTTGGAAGGTTGATAAGCTTGACTTTCTAGCTTGCTTTGGAGCCTTCTTTGGTGTACTCTTTGCATCTGTTGAGATTGGTCTAATTGTGGCTGTGACAATATCATTTGCAAAGATTGTTATAATTTCAATTCGACCTGGAATAGAAACTCTTGGAAAACTTCCTGGAACTGATTTGTTCTGCGATGTGTATCAATATCCTATGGCTGCTCAAATTCCAGGGGTTGTTATAATTCGTATCAAATCTGCATTACTTTGCTTTGCCAACGCCAATTTCGTTAGAGAAAGGATTGTGAAATGGGTGACTCAGGAAGAATCAAAGGGTGACATGAAACATTCAAGAAGCACGATCAACCTCATAATCATTGATACCTCCAATTTGGTGAATATTGACACATCTGGAATTGCTTCTCTAGAGGAACTTCACAAGAGTTTGTCTTCACATGGGAAGCAGTTGGCCATTGCAAACCCTAGATGGCAAGTGATTCACAAGCTAAAAGTCTCAAACTTTATCACCAAAATCAGTGACAGGGTCTTTCTAACTGTTGAAGAAGCTATTGGCTACAAGACTGAGTGCTAA 1971 0.3942 MASSRDMETCKSEHMQVDIDQKNSFQDKIVRSQWVLNAPEPPSPLHVVADSVKKTISRVRKRFSSMADQSCTTLLLSVLQGIFPILGWGRSYTVAKFRKDFLAGLTIASLCIPQSIGYATLAHLDPEYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLVDPTTNPLAYTKLILLATLFAGIFQTAFGFFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLLGITHFTTKTDIISVMKAVWESFHDPWNPRNFILGCSFLVFILTTRILGKKKKKLFWLASISPLVSIIVSTLVVYLTQADKDGVKIVKHVKGGLNPSSIHQLDFNNPYVGEVAKIGLVVAIVALTESVSVGRSFASIKGYQLEGNREMVSIGLTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAITVLISLQFLTKLLYYTPTAIIASIILSALPGLIDINEAYKIWKVDKLDFLACFGAFFGVLFASVEIGLIVAVTISFAKIVIISIRPGIETLGKLPGTDLFCDVYQYPMAAQIPGVVIIRIKSALLCFANANFVRERIVKWVTQEESKGDMKHSRSTINLIIIDTSNLVNIDTSGIASLEELHKSLSSHGKQLAIANPRWQVIHKLKVSNFITKISDRVFLTVEEAIGYKTEC 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1613 656 CDD STAS_SulP_like_sulfate_transporter 530 646 - -
Lal17g1613 656 Gene3D STAS domain 509 655 IPR036513 -
Lal17g1613 656 ProSiteProfiles STAS domain profile. 549 653 IPR002645 -
Lal17g1613 656 ProSitePatterns SLC26A transporters signature. 126 147 IPR018045 GO:0008271|GO:0008272
Lal17g1613 656 TIGRFAM sulP: sulfate permease 84 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal17g1613 656 PANTHER SULFATE TRANSPORTER 2.1 55 651 - -
Lal17g1613 656 Pfam Sulfate permease family 97 477 IPR011547 GO:0016021
Lal17g1613 656 PANTHER SULFATE TRANSPORTER 55 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal17g1613 656 Pfam STAS domain 530 649 IPR002645 -
Lal17g1613 656 SUPERFAMILY SpoIIaa-like 533 651 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1613 Lal-Chr17 17517495 17525756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1613 26 650 Inorganic Solute Cotransporters AT5G10180 66.613 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1613 K17469 - gmx:100817831 1082.78