Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1602 ATGTTTAATCAACAAAAAGAAGAATTGGCTTATCTTAGTGGCTTTGTTGTTGCATTTAAAGAACAAATTCACACTGATATATTCGTCAATCCAGGCATAAATGGTTCACCCATACCTGCACATAAGTTCGTATTGGCGACAAGATCAGAAATATTCAAGAACATGCTAGAGTGTGATGATTGCAAATCTTCACCCAACAACACCATAACTATACCAGATTTGAACCATGAAGAACTAGAGTCTCTCTTGGAATTTCTCTATAGTGGAACTTTGCCAACACAAACATTAGAAAAACATGTTTATACCTTATCAAGAGCAGCTGATAAGTACATAATTCCACATTTGTTGAAACATTGTGAAAGACACTTGTTGAGTTCACTAAACATTTCTAATGCTCTTGAAACACTTGATGTTGCTGATTCATGTTCCAACCATAACTTGAAAGAGACAACCTTGAATTTCTTAGTTAAAAACTTTGAACATGTAGTGTCATCTACTAAATTTGAAGCATTTGTCCATAGAAGTCCACACTTAACTGTGCAACTAGTTACAAGAGCATTTGCTAATGATGAGTTATCCATTGAGGAAGAAGCTGAGAGAAAAGTTGGGTGGCTATTGAAGTCCATATTTTTCGTGACTGCAGGAGCAGCGGGATACCATTTCTTTCCTTACATGGGAGAAAACTTAATGCAGCAGTCTGTATCGCTATTGCGTGTCAAGGATCCCTTGTATAAAAGGATGGGAGCTTCTAGAGTGGCTCGTTTTGCAATAGATGATGAAAGAAGGATGCAGATAGCTGAGATTGGTGGACATAAAGAGCTCTTAAACATGTTAAGCACGGCTAAAGACGACCGTACACGGAAAGCAGCATTGACTGCTCTTGATGCACTGTCACGTTCAGATGCAGTTCTTGCATCGATGCATCGTGCTGGGGCAGTGTCAATTATTAAGTCTTCACCAAATTCTCTTGAGGATGCAGATGTTGAGAAGTTCAAGTTGAGCTTGATGAAAAGGTTCCAAGATATGAAATATGAAATATGA 1041 0.3814 MFNQQKEELAYLSGFVVAFKEQIHTDIFVNPGINGSPIPAHKFVLATRSEIFKNMLECDDCKSSPNNTITIPDLNHEELESLLEFLYSGTLPTQTLEKHVYTLSRAADKYIIPHLLKHCERHLLSSLNISNALETLDVADSCSNHNLKETTLNFLVKNFEHVVSSTKFEAFVHRSPHLTVQLVTRAFANDELSIEEEAERKVGWLLKSIFFVTAGAAGYHFFPYMGENLMQQSVSLLRVKDPLYKRMGASRVARFAIDDERRMQIAEIGGHKELLNMLSTAKDDRTRKAALTALDALSRSDAVLASMHRAGAVSIIKSSPNSLEDADVEKFKLSLMKRFQDMKYEI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1602 346 SMART BTB_4 25 127 IPR000210 GO:0005515
Lal17g1602 346 CDD BACK 128 168 - -
Lal17g1602 346 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 3 191 - -
Lal17g1602 346 SUPERFAMILY ARM repeat 234 318 IPR016024 -
Lal17g1602 346 ProSiteProfiles BTB domain profile. 25 95 IPR000210 GO:0005515
Lal17g1602 346 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 3 191 IPR044784 -
Lal17g1602 346 Gene3D Potassium Channel Kv1.1; Chain A 2 124 IPR011333 -
Lal17g1602 346 Pfam BTB/POZ domain 22 126 IPR000210 GO:0005515
Lal17g1602 346 Gene3D - 126 202 - -
Lal17g1602 346 Gene3D - 223 328 IPR011989 -
Lal17g1602 346 SUPERFAMILY POZ domain 11 125 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lal17g1602 BTB 4.6e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1602 - K10523 gmx:100814664 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1602 17 17403796 17409467 Lal17g1602 17 17403796 17409467 ECH