Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1594 ATGGAGAGACAATCTGAATTATATGACTTAGAGGGTAATCCTAAGAAAATATGTATCAGAAATGATAGAAATATGGGTTCTTTAGGTGTTTGGGTTGGTGATAGTCCATTTGAATTTTTAGTTCCTGTCACATTGTGCCAAATTATTGTTCTAGTTCTAATCTCTCAAGGGCTTTCCTATGTTCTCAAGCCTCTCAAAACACCCAGATTCATCTGTAGTATTCTGGCTGGCATTCTGTTGGGGCCATCATTTTTAGGGCACAGCCAAATATTCCTAGACACATTGTTTCCATGGAAACAAGCTTCACTTTTACTCACATTGTCCAAGATAGGTGTTGTATATTTTGTGTTCATTACAACAATGAAAATGGACATAATTGCAACCCTGAGAGGAGCAAGACGTTGTTGGCTATTTGGGGTAATACCATTCTTATCTTCATATATAGTTACAGCATTACTCTTAAGTTTTTATAATCCTGGAGGTAAAGTTGATGAATCAGAACAAATTGTTCCCAATGTCTTCACTTTAAGTAGTTTTGCTGTTGTTACTCAAGCATTGCTAGAACTCAATCTTCTAACAACAGAACTAGGGCAAATTGCTTTGTCTTCAACCCTGATAGCTGAAATAATGCAATGGACTTCTATGGCACTTCAGTTCAAATCCATGAAGCAGTTCAATTATTCAGTTGAAATTGTGATCAGCTTATTAGCTTTTGTATTGTTTTGTGTTTGGGTTATACGACCAATTATGAAGATGATTGCTAGAAAAACACCAATGGGACAACCACTGAAAGAATCTTATGTTGTTATGATACTTCTTGGTGCATTAGTTTCTGCAGCAATTTCTGATTATATTGGTATATCATTTGTAATAGGACCTACCATTTATGGTTTGGTTATGCCAAATGGACCACCTTTGGCAACAACAATTTCAGACAAGAGTGAAGTTATTATATCACAGATTCTTATGGCTTCTTTCTACATATATGTTGGCATAAACACCAATTTTACTAAGATACAGAATTGGAAGATGGTTATAACATTTCAGTGTATCTTATTTGTGGGTTTCATGGTAAAGGTCATTGCTTGTGTGCTTCTCTCTTCAAGATATAAGATTAGGCCAAAACATGGCATGGCTCTTGGGTTAATATTAAGCGTCAAAGGCATAATCGAACTCTTATTTTTCACTCGACTAAGGAACAATGGGATTATTGATGGACAAGTATTCAGTCAAATGGTACTTTATGTGGTGTTGATGACCTCAATATGTGCACCCTTGATCAAAGTCTTGTATAAACGTAACCCACGTGTGTTGAAACCACAAAACAGTGTTGAAGGGCATGTGATGAGAACGATACAAAACACTTTTGAAAACATAGAATTCAACATTGTTTCTTGTCTACACAATGATGGTAATGTACATAGCATGATTGCATTGCTAGAGACTTGTAACCCAAGCAAAGAAAGCCCAATATGTGTCCATGTAATTCATCTCATTGAGCTATCAGGAAAATTCACACCAGTTCTTCTTCCTATGAATAAGCAAAATAGAAAATCTTTGTCCATAAACTACCCCAACACTAATGCTATCTTTAGAGCATTTGAGAACTACTCCAACAATTCTAGTGGTCCAGTCACTATTCTTTCATATATTAATGTTGCACCTTATGATAGCATGCATGAAGCTGTTTGTAACTTAGCTGAAGACAAATTGGTTCCTTTCATTATCATACCCTTTCATGGGAATAATCAAAGCCTAGGTACCCTCACAGAACCTTTCATTCGTGACCTTAACACTAACTTTCTAGATAGTGCACGATGCACTGTGGGGATACTTGTAGATAGGTACTCATCACTAGGTTTGAGCATCTCCAAGATATGTTTTCATGTGGGAATCTTCTTCATTGGTGGAACAGATGATAGAGAGTCATTAGCATTGGGTATCAGAATGTTGGAGCGTTCGAATATTAGGGTTACCTTGTTGAGGTTCGTCATGAAAAATGATATCGACAACGATGTTAATTTTGAAATGTTGAATGAAAATGATGAGGTAGAGAAAGAGAAAGATGAAAGTTTAGTAGATGAATTTAATGGAAAGAAATATAATAACGATAATGTAGTTTTCGATGAGGTTGCGGTGGAGGATTGTATCCGATTGATGGAAGCGATTCGAGAAATGTCGACCGAGAAAGACTATGACCTTGTAATGGTGGGTAAGCGACATAGTATGGGGGATTTGAGAGAGGAAGAAATGTCAAATTTCATGGACAATGTAGATCAATTGGGAATTGTTGGAGATATGTTGGCATCCACAGAATTTTGTAGTGGCAAGGTTCCAATATTGGTGTTGCAATGTGGTGAGAATCAGGTAAAACAAATTGAGAGACTAGGCTCTACCATGCTTACAAAATGTGTAGAGAAGTGTTAG 2427 0.3655 MERQSELYDLEGNPKKICIRNDRNMGSLGVWVGDSPFEFLVPVTLCQIIVLVLISQGLSYVLKPLKTPRFICSILAGILLGPSFLGHSQIFLDTLFPWKQASLLLTLSKIGVVYFVFITTMKMDIIATLRGARRCWLFGVIPFLSSYIVTALLLSFYNPGGKVDESEQIVPNVFTLSSFAVVTQALLELNLLTTELGQIALSSTLIAEIMQWTSMALQFKSMKQFNYSVEIVISLLAFVLFCVWVIRPIMKMIARKTPMGQPLKESYVVMILLGALVSAAISDYIGISFVIGPTIYGLVMPNGPPLATTISDKSEVIISQILMASFYIYVGINTNFTKIQNWKMVITFQCILFVGFMVKVIACVLLSSRYKIRPKHGMALGLILSVKGIIELLFFTRLRNNGIIDGQVFSQMVLYVVLMTSICAPLIKVLYKRNPRVLKPQNSVEGHVMRTIQNTFENIEFNIVSCLHNDGNVHSMIALLETCNPSKESPICVHVIHLIELSGKFTPVLLPMNKQNRKSLSINYPNTNAIFRAFENYSNNSSGPVTILSYINVAPYDSMHEAVCNLAEDKLVPFIIIPFHGNNQSLGTLTEPFIRDLNTNFLDSARCTVGILVDRYSSLGLSISKICFHVGIFFIGGTDDRESLALGIRMLERSNIRVTLLRFVMKNDIDNDVNFEMLNENDEVEKEKDESLVDEFNGKKYNNDNVVFDEVAVEDCIRLMEAIREMSTEKDYDLVMVGKRHSMGDLREEEMSNFMDNVDQLGIVGDMLASTEFCSGKVPILVLQCGENQVKQIERLGSTMLTKCVEKC 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1594 808 Pfam Sodium/hydrogen exchanger family 49 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal17g1594 808 Gene3D - 43 437 IPR038770 -
Lal17g1594 808 PANTHER CATION/H+ EXCHANGER 3 22 789 - -
Lal17g1594 808 PANTHER CATION/H + ANTIPORTER 22 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1594 Lal-Chr17 17327938 17333198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1594 29 784 Antiporter Super Family AT2G13620 32.606 5.48e-140 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1594 - - mtr:MTR_3g071880 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1266 21 15883250 15886835 Lal17g1594 17 17327938 17333198 LSH