Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1585 ATGCAAAACAAGAAAATGATCATTAGGAACTGGAAATTCAACCGCTTTAAGGATCAAAAAGGAGTTTTGTACCTTCTAGCTTTGTGTGTGTTGTTTCAGAGCTTTGGTTTGTGTCGCTCTTTGAATGAAGAAGGTAAAGCACTTTTGAAGTTGAAGGAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGGTTGATGATGAAGTAGCAGTTGACCCTTGTAATTGGTTGGGAGTTGAGTGTTCAGATGGTAGAGTGGTAGTGTTGAATTTGAAAAACCTTTGTCTTGGAGGAAGTTTAGCACATGAGCTTGAGAATCTTGTTAACATTAAGTCTATTATTTTGCGGAACAATTCCTTTTATGGCACCATCCCTTCAGGAATTGTACACTTGAAAGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGAGCTCTGCCTAGAGATCTTGAGAGTAATATTTCACTCACAATCCTTTTACTGGACAACAATGATCTTCTTGGTGGATTCTCTCCTGAAATTAACAAATTGAAGGTGCTTTCTGAATGTCAAGTAGACAAAAAGGGTCTAATTAGTACAGATAAAATGTCAGCTTCTACAGGACGATCCATCAAATGGTATGTTCGTCAAAATAAAAAAGCTCGTCGGAGCCTACTGCAATCTCGTATTCTTGAACATGATGATATTCATAATCGTGCAACCCATTTTCCTGATACCCCAGCCCCATCACCTGTGACTTCCCCAGATCCTCTTTCAGTTGCACCATCACTAGCGCCGATACCAGTTCCCCCTGAACAAATTGATTCTGATTCTCCTTCTCCGATGCCAGACTCTCCTTCTCCGATGCCAGATTCTCCTTCTCCCCTACCTACGCCAGGTTCTCCAACACAATCTAAAAGTAATTCAACGAAACACAATTATGTCACTATTTTAGCTGGAGTTGGAGGTGGTGTTGTATTTCTTGTTATTTCAATCACAGGCGTATATCTATGCAAAACCAACAAGGTAGCTACTGTAAAACCTTGGGTCACGGGATTAAGCGGACAGCTTCAGAAGGCATTTGTGACAGGTGTGCCGAAGCTAAAGAGATCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAACGTACTTGGTACTTCATCCATCGGTACAGTGTACAAAGGGACTTTATCTAGCGGTGTTGAAATAGCAGTAGCCTCGGTTTCAATGGAATCATCTAGTAAGTGGTCAAAGACTTCAGAAATCCATTTTAGGAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTGCTTGGATATTGTGGAGATGACAAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCGCCAAATGGAACACTCTTTGAGCATTTACACATACAAGAAGCTGAGCACTTGGATTGGGGAACGCGACTAAGAATTGTCACGGGAATGGCTTACTGCTTGCAACATATGCACCAGCTGGACCCTCCTTTGCCACATAGCAATTTGAATTCTTCAGCTGTTCAACTCACTGATGACTACGCCGCCAAAATCTCCTATCTGAGTATCTTCAATGAAATAGGAAATCCTAAGAAAAAATCGGGCGCTAAACATATTGAAACGACATTAGCAAGTAATGTTTACAGTTTTGGTGTCATATTATTCGAGATAGTAACAGGCAGGCTCCCTTATTCTGTGGATAATAATGACTCACTTGAAAACTGGGCATGGCACTATTTACAAGGCGATCGGGCGATCAAAGAAATGGTGGATCCAACCTTAGCTTCATCCGATGAATATCAGCTTGAACAAGTTACTGCTTTGATTACATCTTGTGTCCACTATGATCCAGAGAAGAGACCAACAATGAAAGAAGTTAGTATGAGGTTGAGAGAGATAACAAACATAACACCTGCAGCAGCTGTTCCAAAGCTTTCTCCACTTTGGTGGGCAGAACTTGAGATTTCTTCTCCGGACGCAAGCTGA 1995 0.41 MQNKKMIIRNWKFNRFKDQKGVLYLLALCVLFQSFGLCRSLNEEGKALLKLKERIVSDPFGALSNWVDDEVAVDPCNWLGVECSDGRVVVLNLKNLCLGGSLAHELENLVNIKSIILRNNSFYGTIPSGIVHLKELEVLDLGYNNFSGALPRDLESNISLTILLLDNNDLLGGFSPEINKLKVLSECQVDKKGLISTDKMSASTGRSIKWYVRQNKKARRSLLQSRILEHDDIHNRATHFPDTPAPSPVTSPDPLSVAPSLAPIPVPPEQIDSDSPSPMPDSPSPMPDSPSPLPTPGSPTQSKSNSTKHNYVTILAGVGGGVVFLVISITGVYLCKTNKVATVKPWVTGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVLGTSSIGTVYKGTLSSGVEIAVASVSMESSSKWSKTSEIHFRKKIDTLSKVNHKNFVNLLGYCGDDKPFTRMVVFEYAPNGTLFEHLHIQEAEHLDWGTRLRIVTGMAYCLQHMHQLDPPLPHSNLNSSAVQLTDDYAAKISYLSIFNEIGNPKKKSGAKHIETTLASNVYSFGVILFEIVTGRLPYSVDNNDSLENWAWHYLQGDRAIKEMVDPTLASSDEYQLEQVTALITSCVHYDPEKRPTMKEVSMRLREITNITPAAAVPKLSPLWWAELEISSPDAS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1585 664 Gene3D Transferase(Phosphotransferase) domain 1 458 644 - -
Lal17g1585 664 PANTHER BNAA09G55080D PROTEIN 9 664 - -
Lal17g1585 664 Gene3D Ribonuclease Inhibitor 40 230 IPR032675 -
Lal17g1585 664 Pfam Leucine rich repeat N-terminal domain 42 84 IPR013210 -
Lal17g1585 664 Gene3D Phosphorylase Kinase; domain 1 351 457 - -
Lal17g1585 664 PANTHER PROTEIN MALE DISCOVERER 2 9 664 - -
Lal17g1585 664 MobiDBLite consensus disorder prediction 245 297 - -
Lal17g1585 664 ProSiteProfiles Protein kinase domain profile. 375 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1585 664 SUPERFAMILY L domain-like 44 186 - -
Lal17g1585 664 Pfam Protein tyrosine and serine/threonine kinase 377 632 IPR001245 GO:0004672|GO:0006468
Lal17g1585 664 SUPERFAMILY Protein kinase-like (PK-like) 368 653 IPR011009 -
Lal17g1585 664 MobiDBLite consensus disorder prediction 236 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1585 Lal-Chr17 17264554 17269566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1585 23 629 Receptor kinase-like Gene Family AT1G66830 25.980 5.88e-43 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lal17g1585 PK_Tyr_Ser-Thr 2.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1585 - - gmx:100784541 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1585 17 17264554 17269566 Lal17g1585 17 17264554 17269566 ECH
Lal4g1587 4 20041217 20045601 Lal17g1585 17 17264554 17269566 LSH
Lal21g1261 21 15828115 15832417 Lal17g1585 17 17264554 17269566 LSH