Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1579 ATGTCAAGCCACAATTATCGTTTACTAAACTGGCACTACACAGAGTTAGATGACATTGATCATCAAATTCGAGGAAGAAACCTTTTCTTCATAATCCTCATCTTCTCTATTTCCCTTCTCATCACCGTTCTCTTCTTCTACACGCGCTGGGTCTGCCGCTACTACGGCCACCTCCCACTCACCTTCTCCACCACCTCCGCCGCCCAATCCAGCCACGCGCCGCCGCCACCTCCGCCTCAAGGACTTGACCCTACATCGATTAAAAAACTGCCCATCATATTGTACCAGGCGCCGGTAGACCATGACGGCGGCGCGTGGGAGGAAAGTGAGTGTTGCATATGTCTGGGAGAGTTTAGAGAAGGTGAGAAGGTTAAGGTTTTGCCAAAATCTTCTCTTATGGTTGAATCTTCTTTTCCTAACGTTTTGATTCAAGAACCACCCATTAGAATTGATATCCAATTCTAA 465 0.4731 MSSHNYRLLNWHYTELDDIDHQIRGRNLFFIILIFSISLLITVLFFYTRWVCRYYGHLPLTFSTTSAAQSSHAPPPPPPQGLDPTSIKKLPIILYQAPVDHDGGAWEESECCICLGEFREGEKVKVLPKSSLMVESSFPNVLIQEPPIRIDIQF 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1579 154 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 130 IPR044675 -
Lal17g1579 154 PANTHER RING-H2 FINGER PROTEIN ATL66 2 130 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1579 8 151 C3H Transcription Factor Family AT3G11110 33.548 2.68e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1579 - - lang:109342610 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1579 17 17243116 17243652 Lal18g1386 18 16157906 16158418 PCT
Lal18g1386 18 16157906 16158418 Lal17g1579 17 17243116 17243652 PCT