Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1573 ATGAAGAAACCACCTTCCTCCGCCGTTAACCTCCTTCTAACCGCCGTTACCCTCATCGCCGTTTTTATATTCTTTTTTATACCTTCATCTCATGCTCTCGGCTCCGGCACAACCCTCGCCGTCACTGATGCATCCGCCACCGTGTGCGGCGTTGTATCAGGACCGCTACCGCACCGGATTGAGTGTTACCGTGGCGGCCAAGTCATCCCCGTCATTCCCAACGTTTCATTCTCCACAATCTCCGGTGGCCGGAGCTTATTCTCCGGCATCAGGTCCGGCAACACAAGTTTGCTGTTATGGGACACCACCAATTCCAATGCCACTTTCCAAAGGAAAAGGCTTTACAACAATGGGAGTGTTCCATTGGAGAATCTTGCAGTTGGTGATAGCCACGTTTGTGCAACCGTGGCTAACTCTGGAACTGTGGAATGTTGGAGAATTAGCAACACATTTGAATTGCCATCTGGGTATGAAAGTTTTGTTTCAATTTCATCTGGGTATGGTTTCTCTTGTGGGATTTTGAAGAAAAATGGTTCCTTTGTTAAGTGTTGGGGTGAAAGAGCAATTTCTAGTGAGATAGAGAATGGGTTTGGGAACATGTCTATGTTGAGTATTGTAGCAGGAGGTGAACATGTTTGTGGATTGAACTCAACTGGGTTTTTGGTTTGCAGAGGAAACAATAGTTTTGGTCAACTCAATGTTCCTCAAGGTGGTGCTTTGGAATATTCAGGTTTGGCACTTGGTGCTGAACATAGTTGTGCAATTAGGTCTAATGGTTCAGTTATTTGTTGGGGTGGTAGAGGCCAATTCTCTTATAATGTCACACAACAAGTTTCTTTTGAATTGATTGTTTCTGGTTCCAATTTCACTTGTGGATTGACAACAGTTAATTATTCAGTTGTGTGTTGGGGCCCTGGTTGGTCTAATTCAAGGTTTGAGGAGCTTCCCTTACCTAGGATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGTGGTATATATCCTGATTCTCAATCACTATGTTCTGGACTTGGTAACATTTGCAAGCCAAAGCCTTGTTTGCCTCAAATACCAGTGCCAAATTCGCCACCGCTATCACCACCACCACCGACAGTAGTGTTTGCTCCATCACCATCTCGGTCGAAGACCTTGACGAGAGGTTTATTGGCATTTGCAATTGTTGGATCAGTGGGAGCTTTTGCTGGTATTTGCACAATAGCTTATTGCTTGTGGACCGGTGTTTGTTTCGGGAAGAAGAAAGTACATAATTCTGTGCAACCAACAATCACTAGAGGTGGTAGTAGTTCCACTTCCAATGGTGGGAGTGTTCCGAATAGTACCCCACCTTCGAGATCATCTACCATTAGGCGCCAGGCTTCGAGGATCATCAGGCGGCAGAGGAGCGGAACTTCGTCATTTAAGCATCATGATAAAGCTGAGGGTTTCACCCTGGCTGAGCTTGTAGTAGCGACCGACAATTTCTCACTCGAGAACAAGATTGGTGCTGGAAGTTTTGGTGTTGTGTACAGAGGTAAACTCGCTGATGGTCGTGAAGTTGCGATCAAGAGGGGTTTCGAAACCAGTTCAAAGATGAAGAGGTTTCAAGAGAAAGAGAGTGCTTTTGAATCTGAATTGGCCTTCTTGTCTCGTTTACACCACAAGCACTTGGTTAGGCTAGTTGGATTCTGTGAGGAGAAAGATGAAAGACTCTTGGTGTATGATTACATGAAGAACGGGGCACTACATGGTCACTTGCATGGCAAAAACAACATAGAAAAGAGTGCTAGTGTCTTGAATTTTTGGAAAATAAGGATCAAAATCGCTTTGGACGCGTCACGAGGAATAGAGTATCTCCATAATTATGCAGTTCCATCTATAATTCACAGAGACATCAAGTCTTCTAATATCCTTCTTGACGCGAATTGGACAGCAAGAGTATCCGATTTTGGGTTGTCATTGATGAGTCCAGAGCCTGACCATGATCAAAGACCAACGAAGGCAGCTGGAACTGTAGGATACATCGATCCCGAGTATTACGGTCTAAATTTATTGACAGCCAAAAGTGATGTCTATGGACTTGGAGTTGTACTGCTAGAACTTCTAACAGGAAAAAGAGCTATATTCAAGAATGGCGAAGACGGCGGCAATCCATTAAGGTTGGTAGACTTTGCAGTGCCTGCTATTATGGCCGGAGATTTGGTGAAAATTTTGGACCCAAGGGTTGGACCGCCGGAACATAATGAAACCGAAGCAGTGGAATTGATGGCATATACTGCTATGCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACAATGGCTGACATTGTTTCCAATTTGGAGAGGGCTTTAGTTCTTATTGATAGTAGCTATGATAGCAATTCAAGTGGTATAATCTCTATTGTTTCAGAATGA 2421 0.4416 MKKPPSSAVNLLLTAVTLIAVFIFFFIPSSHALGSGTTLAVTDASATVCGVVSGPLPHRIECYRGGQVIPVIPNVSFSTISGGRSLFSGIRSGNTSLLLWDTTNSNATFQRKRLYNNGSVPLENLAVGDSHVCATVANSGTVECWRISNTFELPSGYESFVSISSGYGFSCGILKKNGSFVKCWGERAISSEIENGFGNMSMLSIVAGGEHVCGLNSTGFLVCRGNNSFGQLNVPQGGALEYSGLALGAEHSCAIRSNGSVICWGGRGQFSYNVTQQVSFELIVSGSNFTCGLTTVNYSVVCWGPGWSNSRFEELPLPRILPGPCVQSSCSECGIYPDSQSLCSGLGNICKPKPCLPQIPVPNSPPLSPPPPTVVFAPSPSRSKTLTRGLLAFAIVGSVGAFAGICTIAYCLWTGVCFGKKKVHNSVQPTITRGGSSSTSNGGSVPNSTPPSRSSTIRRQASRIIRRQRSGTSSFKHHDKAEGFTLAELVVATDNFSLENKIGAGSFGVVYRGKLADGREVAIKRGFETSSKMKRFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYDYMKNGALHGHLHGKNNIEKSASVLNFWKIRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDANWTARVSDFGLSLMSPEPDHDQRPTKAAGTVGYIDPEYYGLNLLTAKSDVYGLGVVLLELLTGKRAIFKNGEDGGNPLRLVDFAVPAIMAGDLVKILDPRVGPPEHNETEAVELMAYTAMHCVNLEGKDRPTMADIVSNLERALVLIDSSYDSNSSGIISIVSE 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1573 806 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 11 801 IPR044815 GO:0004674
Lal17g1573 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Lal17g1573 806 Gene3D Phosphorylase Kinase; domain 1 455 577 - -
Lal17g1573 806 SUPERFAMILY RCC1/BLIP-II 30 265 IPR009091 -
Lal17g1573 806 MobiDBLite consensus disorder prediction 429 459 - -
Lal17g1573 806 ProSiteProfiles Protein kinase domain profile. 496 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1573 806 Gene3D Transferase(Phosphotransferase) domain 1 578 796 - -
Lal17g1573 806 Pfam Protein kinase domain 497 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1573 806 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Lal17g1573 806 SUPERFAMILY Protein kinase-like (PK-like) 474 783 IPR011009 -
Lal17g1573 806 Gene3D - 198 349 IPR009091 -
Lal17g1573 806 Gene3D - 28 197 IPR009091 -
Lal17g1573 806 MobiDBLite consensus disorder prediction 429 460 - -
Lal17g1573 806 SMART serkin_6 496 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1573 806 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 11 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1573 Lal-Chr17 17140840 17143260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1573 1 806 Receptor kinase-like Gene Family AT3G55950 60.602 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lal17g1573 Pkinase 5.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1573 - - gmx:100786639 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0222 22 1370747 1373164 Lal17g1573 17 17140840 17143260 ECH
Lal17g1573 17 17140840 17143260 Lal17g1573 17 17140840 17143260 ECH