Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1539 ATGATGATGTGGGTAGTTTTGTCACTGATTCTGAAGTTTTGCATCATTTTCTCTTTTGTTGCAGTCCAAGGTTCCAATACCAAAGGGCCTATTATATCCCCATCTCAAGCATTCCTTCATGTAATTAATCATATTGGAGAAGCACCTGGTCCTGTCCACCTTGGAGAGTCACGGGGAAGCAATGCACGAAGCTCACCCTCAGAACAAGACGGGTTTGTTATATCCCAGTCTCCAGCTACCTTACCTGTACATCGTTCACCTCGTGAGGCACCTATTATTTTGCCCCCGAGAGATCCATGGAGAACAATTGCTCCAAGCTCTCCGGAAGTACCTAAAGGACCATTCTTGCACCCTCCAGTTATGTTACCGTTACCGCATCCAACATCAGCTCCGACTCAACATAAAAGAATTGAACCATTTAAATCTTTTAGTCCTAGTCCAAGCACCATAGCATTACCGCTGCCATATGATGCTTTTCCTGCACCATCAACTGCTCAATGGAATGTACCTCCGAAATCAGCTCCAACTCCTCGGGAGATTAAAGGAAATGATCCGTTCGTTTCTCCTAGTCCTAGTCCAAGCCTCATGACATTATCACCACCATATAAGGCTGTTCCTGCGCCATCAACTTCTCAACAGGATGGGCTAGTTCCTACATCAGCTCCAGCTCCTCGGAAGAGTAAGGGAATTGAACCATCCAAATCTTTTAGCCCTAGTCCAAGCACCATAACCTTCTCACCACCATACGAGGCTGTTTCTGCGCCATCAACGACTCAGGGGAATGTGCCAACATCTTCTCAACCAAGTCCACCTCAAAGGAAAGCACCTGCTGCATGGCCTCCTGAATCGACACCAACTACTCCAGCTCCATTTGCAATGTCCTCTAGCAATTTGCCAAAAACCTCACCAATCAGCCAACACGGTCCAAGGACCGAAACAGTATCAACATCTGCTCCTGCATCATCAAATGCCCAAGGGAATGTGGCACCATCTATACAACCTAGTCCACCTCCACCGCAAAGGAAAGCACATCCTGTTTGGCCTCCTGTATTCACACCAATTGCTCCAGTTGCAATACCTTATGGCAATTTGCCAAAAAAATCACCAATCAGCCAACCAATTGAACATGGAAGTTTGCCTCCAAAGGTTGATAAGAGGAATGCACATAAGAGTCACACCTTAGAGCCAGTTTCACCAGCCTTAGTTGCAACTCCTTCAATCAATTTGCCGATAATTTCACCAGTAAGTCAACCACATGAAAATGGAAGTTCTCCTAATGTTCATAAAGAGGGTGCAAACAAAGCCCCTATAGCATTCAGTTTGTCACAACATTCGCCGGTGAGTCAGCCAACGGAACACGGAAATTTCTCTCCAACTTTTCATAAAAGGAATTCCAATAGAGGTCACATATTCGAGCCAGTTTCACAAGCCCCGGTTGCAATACCTCCTACAATTTTGCCAGATGATTCACCAGTCAGCCAACCAACTCATCATGGAAGTTTTCCACCCGGTGTTCATGAAAGAACTGAAAATAAGGATCATAGTCACATCCAAGAGCCAGTACCACCAGAAGCTATTGCATCTCCACCATCGAAAATGAAAGATAACCAACCAGCAGGCCACCCTATCTTACGAAAAATTATTCCATCCACATTACCTGTACCAGTTACATCACCAACAATTGCAATACCAGTAATTGCACCATCAGTTCACCCTGTTACACCAGCGATATCTCCTTCAAAATTACCAGGTGGTGCAGAAACTGTTGTCTCTTCTGCATTATCTCCTTCCAGAAGCTTCAATTGGAAAAAAGGTGGAGAACCAGTTTTTTCACCTTTATACAAAGCACCAAAGCCACTACCACCTATAGTACATTCCCCTGCTCAAGCTAATGCTGCTCATAAAACAAGGCAATTCCATCATGCTCCAAAACCACTGATTTCATCTCCCGAACCTCCTATCAATAAAGATCATTTTCCTGCTTCTTCACCTTCAAACACATTTCATAAGGATAATCATATGACGAACATAATCACCAGCCCTGCCCCTGCATCATCATATTTCATTTCTCCTCCCACTTCAAAACACCAAGAACAACTAATTCCTCCCTCATTACTTCCAACAAGTGGACAAAGATATCATGCTCCAACACCAATGGACACAGGTTCTTCAGTTTCCCCATTTGCCTTACCTGTTCTGTCACCTGCGAGCCATGTTTCTCATACTCCTGCTCCTGCTCCTGCTCCATCATTCAAAATATCTCCTCACCGGACCAAAATTCCATTGCATACTCGTAAAGTATCTCCTTATCGGTCTTCATCCATGATCCCTAAGACACCAGACCTCCCTCCGATGCAAGCACTGCCACCCCCACCTCCTAATGAAGATTGTTTATCAACTATTTGCTCAGATCCCTATACAAACTCTCCACCTGGTGCACCTTGCGGATGTTTCTGGCCCATGAAAGTCGGTCTTCGCCTTAGTGTGTCACTTTACACCTTCTTCCCTTTAGTTTCAGAGCTTGCTTCTGAAATTGCCACCGGGGTTTTCATGAGGCAGAGTCAGGTTCGCGTAATGGGAGCCAACATAGATAGCCAACAACCAGATAAAACGGTTGCCCTTATTGATTTAGTACCACTTATGGAAGAGTTTGATAACACTACAGCCTTTCTGACTTCTGAGAGATTTTGGCATAAAGAGGTTGCTATAAAAGCTTCTTACTTTGGTAACTATGATGTGTTGTATGTGACATATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCAAGCATGACCATTATAGATGGTGGCCCATATTCAAGTGATGGAAATAATGGAAGGACAATAAAGCCTCTTGGGGTTGACATACATAAGAGGCAGCAACATAAATCTGGACTTAGCAAGGGAATAATAGCTATTATTACTCTTTCAGCTTTTCTAGCAGTTATTTTATGCTCTTCTGCTGCTTGGGCCTTATTTAAGTACAGAGATCATGTAAGTCAAGCTGCATCGACCCGAAGGGTTTTGCCACCTCCTCTTGCCAAAGCAACAGGTACTGCTGGATCATTAGTTGGAGGTGGGGTTGTTTCGGCTTCATCATCTTTTCGATCTAGCATTGCTGCTTATACAGGATCTGCTAAGACTTTCAGTATGAGTGAGATTGAGAAAGCCACTGACCACTTTAATGATTCAAGAATAATTGGAGAAGGTGGTTTTGGGCGTGTTTACAGCGGTATCCTTGAAGATGGGATAAAAGTTGCTGTCAAGGTTCTAAAAAGGGAAGATCATCACGGTGATCGCGAATTCTTAGCCGAAGTTGAGATGTTGAGCCGCCTTCACCATAGAAATTTGGTTAAGTTGATTGGTATATGTTCAGAGGACAGCCTCCGTTGCTTAGTTTATGAACTTATTCCAAATGGCAGTGTGGAATCTCATATACATGGAATTGGCACAGAAAAAGTTCGATTAGATTGGAGTGTCCGTTTGAAGATAGCTCTCGGTGCTGCTCGTGGTCTGGCTTATCTGCATGAAGATTCAAGTCCTCCGGTCATACATAGGGACTTCAAGTCAAGCAATATCTTGTTGGAAGATGATTTTACACCAAAAGTATCCGATTTTGGATTGGCTAGAATAGCATCAGATGAGGAGAACAGACATGTATCAACACGGGTCATGGGAACTTTCGGTTATGTGGCTCCGGAGTACGCAATGACGGGCCATCTTCTGGTGAAGAGTGATGTTTATAGCTATGGTGTCGTTGTTCTTGAGCTTTTGACAGGAAGAAAGCCAGTAGACATGTCACAACCTCCCGGTCAAGAGAATCTTGTTTCGTGGGCTCGTCCGCTCCTCACAAGCAAGGAAGGATTGGAAGCAATAGTAGATCCATCACTAGGAACCACTGTGCCTTTTGAAAGTGTGGCTAAAGTTGCAGCCATTGCCTCAATGTGTGTACAACCAGAGGTATCAGACCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTAAAACTTGTATGTAATGAATGTGATGAAGCAAAAGAATCAGGTTCAAAAGTTTTCGGAATGGAGGATATATCGGTCGATGATTTGAATAACGTTTCTGGACACCAACCGGATAATTTCCTAGGCCAATTCTCAGCCACTAACTACAATTCTGGAGTTGATTATGAAAAGGGGTTATCAGCATCAGAATTGTTCAGCTCCTCGGCAAGGTTCGGAAGGCAAGCATCCGGATCATTTAGAAGACACTCGTATTCGGGTCCTCTAAGAACCGGAAGAAGCAGGCGTATGTGGCAGATTATTAGAAGACTTTCTGGTGGCAGTGTCAGTGAACATGGAATTATGTACAAATTATGA 4356 0.4405 MMMWVVLSLILKFCIIFSFVAVQGSNTKGPIISPSQAFLHVINHIGEAPGPVHLGESRGSNARSSPSEQDGFVISQSPATLPVHRSPREAPIILPPRDPWRTIAPSSPEVPKGPFLHPPVMLPLPHPTSAPTQHKRIEPFKSFSPSPSTIALPLPYDAFPAPSTAQWNVPPKSAPTPREIKGNDPFVSPSPSPSLMTLSPPYKAVPAPSTSQQDGLVPTSAPAPRKSKGIEPSKSFSPSPSTITFSPPYEAVSAPSTTQGNVPTSSQPSPPQRKAPAAWPPESTPTTPAPFAMSSSNLPKTSPISQHGPRTETVSTSAPASSNAQGNVAPSIQPSPPPPQRKAHPVWPPVFTPIAPVAIPYGNLPKKSPISQPIEHGSLPPKVDKRNAHKSHTLEPVSPALVATPSINLPIISPVSQPHENGSSPNVHKEGANKAPIAFSLSQHSPVSQPTEHGNFSPTFHKRNSNRGHIFEPVSQAPVAIPPTILPDDSPVSQPTHHGSFPPGVHERTENKDHSHIQEPVPPEAIASPPSKMKDNQPAGHPILRKIIPSTLPVPVTSPTIAIPVIAPSVHPVTPAISPSKLPGGAETVVSSALSPSRSFNWKKGGEPVFSPLYKAPKPLPPIVHSPAQANAAHKTRQFHHAPKPLISSPEPPINKDHFPASSPSNTFHKDNHMTNIITSPAPASSYFISPPTSKHQEQLIPPSLLPTSGQRYHAPTPMDTGSSVSPFALPVLSPASHVSHTPAPAPAPSFKISPHRTKIPLHTRKVSPYRSSSMIPKTPDLPPMQALPPPPPNEDCLSTICSDPYTNSPPGAPCGCFWPMKVGLRLSVSLYTFFPLVSELASEIATGVFMRQSQVRVMGANIDSQQPDKTVALIDLVPLMEEFDNTTAFLTSERFWHKEVAIKASYFGNYDVLYVTYPGLPPSPPLPPSSMTIIDGGPYSSDGNNGRTIKPLGVDIHKRQQHKSGLSKGIIAIITLSAFLAVILCSSAAWALFKYRDHVSQAASTRRVLPPPLAKATGTAGSLVGGGVVSASSSFRSSIAAYTGSAKTFSMSEIEKATDHFNDSRIIGEGGFGRVYSGILEDGIKVAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICSEDSLRCLVYELIPNGSVESHIHGIGTEKVRLDWSVRLKIALGAARGLAYLHEDSSPPVIHRDFKSSNILLEDDFTPKVSDFGLARIASDEENRHVSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVVLELLTGRKPVDMSQPPGQENLVSWARPLLTSKEGLEAIVDPSLGTTVPFESVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKESGSKVFGMEDISVDDLNNVSGHQPDNFLGQFSATNYNSGVDYEKGLSASELFSSSARFGRQASGSFRRHSYSGPLRTGRSRRMWQIIRRLSGGSVSEHGIMYKL 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1539 1451 ProSitePatterns Protein kinases ATP-binding region signature. 1068 1090 IPR017441 GO:0005524
Lal17g1539 1451 Gene3D Transferase(Phosphotransferase) domain 1 1138 1358 - -
Lal17g1539 1451 MobiDBLite consensus disorder prediction 50 70 - -
Lal17g1539 1451 MobiDBLite consensus disorder prediction 288 330 - -
Lal17g1539 1451 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 606 1450 - -
Lal17g1539 1451 MobiDBLite consensus disorder prediction 443 466 - -
Lal17g1539 1451 MobiDBLite consensus disorder prediction 503 519 - -
Lal17g1539 1451 MobiDBLite consensus disorder prediction 480 540 - -
Lal17g1539 1451 SUPERFAMILY Protein kinase-like (PK-like) 1042 1335 IPR011009 -
Lal17g1539 1451 MobiDBLite consensus disorder prediction 232 268 - -
Lal17g1539 1451 MobiDBLite consensus disorder prediction 331 347 - -
Lal17g1539 1451 MobiDBLite consensus disorder prediction 443 464 - -
Lal17g1539 1451 ProSiteProfiles Protein kinase domain profile. 1062 1338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1539 1451 PANTHER OS01G0750732 PROTEIN 606 1450 - -
Lal17g1539 1451 MobiDBLite consensus disorder prediction 269 287 - -
Lal17g1539 1451 MobiDBLite consensus disorder prediction 165 347 - -
Lal17g1539 1451 Gene3D Phosphorylase Kinase; domain 1 1034 1137 - -
Lal17g1539 1451 Pfam Protein tyrosine and serine/threonine kinase 1066 1335 IPR001245 GO:0004672|GO:0006468
Lal17g1539 1451 CDD STKc_IRAK 1068 1336 - -
Lal17g1539 1451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1184 1196 IPR008271 GO:0004672|GO:0006468
Lal17g1539 1451 MobiDBLite consensus disorder prediction 204 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1539 Lal-Chr17 16782206 16791069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1539 526 1446 Receptor kinase-like Gene Family AT5G56890 53.403 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lal17g1539 PK_Tyr_Ser-Thr 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1539 - - lang:109328269 2222.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1539 17 16782206 16791069 Lal17g1539 17 16782206 16791069 ECH