Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1493 ATGAGTTCTATTATTTCCATTATCATGTCTCCGTTTTTTGTTTTCATCATTCTTTCATTACTATCTCAATCGTCTTCAATATCCTTAGATTTTAAAAGTACTTATATTGTTCACACCAAACACCAAAACAAACCAAACATCTATTCAACTCATCATGAATGGTACACCTCTACTCTTTCTTCTCTCTCCACCACTGACTCTGACTCCAACCCCTTACTCTATACCTACACCATTGCATATAACGGTTTTGCCGCCTCCCTCACTTCTCAACAAGTCGATGAACTTCTCAAATCTGATTCTGTCAACGGAATATACCCGGACACTCTTTATCAACTCCACACCACTCGTACTCCTGAGTTCTTAGGACTCCAAACACATTCAGGTTTACCTATAGGGCTTGTTAATGAAACCCTCAACAAGGCTTTGCATGATATCATCATAGGAGTTCTCGACACTGGAGTATGGCCGGAATCTAAAAGCTTTGATGATACTGGCATGCCGGATATACCTAAAAGGTGGCGTGGAGAATGTGAAAGCGGAGAAAATTTCACTTCCTCTTTGTGTAACAAAAAGCTCATTGGTGCTAGACATTTCTCTAAAGGACTCTACATGGCAATGAGAAGTAAAAATGATAAAGAGAGTAAGACAATAAGTATTTCCCCTAGAGATACAGAAGGTCATGGGACCCATACTGCGAGCACTGCTGCTGGGTCCTACGTGGCTAATGCTAACTTTTTTGGTTTTGCTAGTGGCGTTGCTCGTGGTATCGCCCCACAAGCACGTGTAGCTGCCTATAAGGTTTGCTGGGAGGAAGGTTGTTCTTCATCTGACATCCTTGCTGGCATTGAACGTGCCATCGAGGATGGCGTTGATGTATTATCTCTCTCACTCGGTGGCAGGTCAACACCTTATTTTTTCGATCCAATCGCGCTTGGAGCTTTCGCTGCCACAAAGAGAGGGATATTTGTGTCATGCTCTGCTGGAAACAGTGGACCCAAACCAAAATCGATTTCTAACGTGGCACCTTGGATTATGACCGTTGGGGCTGGGACCTTGGATAGGGATTTTCCGGCTTACGCAGTTCTTGGGAATAAAAATCGGATCGTTGGTGTTTCACTTTATAGTGGGAAAGGAATTGGGAGTAAACCGGTGGGCCTGGTTTATAACAAGGGGGTAAAGTCGAACCAATCGAGTAGCATCTGTTTACCTGGTTCACTTGACCCAAAGTTGGTTCGTGGGAAGGTGGTGGTTTGTGATAGGGGAGTTATTGCACGATTGGAGAAAGGAATAGTTGTGCAGAAAGCTGGTGGTGTTGGGATGATATTGGTAAATACGGTGGAGAACGGGGAGGAGACTGTGGCAGACAAACACATCTTGCCGACTGTTGCACTAGGGAAAAAAGCTGGAGATAAGATAAAGGAGTATGTGAAGTCAGATCCAAATCCGACGGTGGTTTTGAGTTTTGGTGGGACGGTTTTGGATTATAAGCCAGCACCAGTGGTTGCAGCGTTTAGTTCAAGAGGGCCAAATGAAGTTACGCCTCAAATTCTAAAACCAGATGTTATTGGTCCTGGGGTTAATATCTTGGCTGGGTGGACAGGTTTTGATGAAACCTCTACCTTGTCTATAGATAATCGCAAATCACTCTTCAATATTGTGTCAGGTACATCTATGTCTTGTCCACACATAAGTGGTTTGGCTGCATTGATAAAAGCAGCTCATCCAAAGTGGAGTCCTAGTGCAATCAAGTCTGCACTAATGACAACAGCATATACCCTTGATAACACAAACACCCCACTCCATGAAGCCTCAGTAGAAGCCATTTCCACTCCATGGGATCATGGCGCCGGCCATGTCGACCCACAGAAAGCACTCTCTCCTGGCCTTGTCTACGACGCATCAACCAATGACTACATCACATTCTTATGCTCCTTGAACTACACCCTGGAGCACGTTCAAGTGATTGCTCAGGACCCTAATATCAATTGTTCTAGGAAATTCTCTGACCCTGGCCAGCTCAATTACCCATCATTCTCAATCTTATTTGCAAATAAGAAGAGGGTTGTCCGCTACACGCGTACCTTGACGAATGTTGGTGATGCCAATTCCATCTATAATGTGGCCATTGAAGGGCCACCGACAGTAAGTATAACTGTGAAACCTGATAAGCTTGTGTTTCAGAAAGTACTTGAAAAGAAAAGGTACACTGTGACATTTGTGTCTAAAAAACGTAATGCTATAAAGGCTGCATCTGGTAGCATCACATGGAGCAATTCACAACACCAAGTTAGGAGCCCAATTGCTTATACTTGGTCAGGATAG 2322 0.4397 MSSIISIIMSPFFVFIILSLLSQSSSISLDFKSTYIVHTKHQNKPNIYSTHHEWYTSTLSSLSTTDSDSNPLLYTYTIAYNGFAASLTSQQVDELLKSDSVNGIYPDTLYQLHTTRTPEFLGLQTHSGLPIGLVNETLNKALHDIIIGVLDTGVWPESKSFDDTGMPDIPKRWRGECESGENFTSSLCNKKLIGARHFSKGLYMAMRSKNDKESKTISISPRDTEGHGTHTASTAAGSYVANANFFGFASGVARGIAPQARVAAYKVCWEEGCSSSDILAGIERAIEDGVDVLSLSLGGRSTPYFFDPIALGAFAATKRGIFVSCSAGNSGPKPKSISNVAPWIMTVGAGTLDRDFPAYAVLGNKNRIVGVSLYSGKGIGSKPVGLVYNKGVKSNQSSSICLPGSLDPKLVRGKVVVCDRGVIARLEKGIVVQKAGGVGMILVNTVENGEETVADKHILPTVALGKKAGDKIKEYVKSDPNPTVVLSFGGTVLDYKPAPVVAAFSSRGPNEVTPQILKPDVIGPGVNILAGWTGFDETSTLSIDNRKSLFNIVSGTSMSCPHISGLAALIKAAHPKWSPSAIKSALMTTAYTLDNTNTPLHEASVEAISTPWDHGAGHVDPQKALSPGLVYDASTNDYITFLCSLNYTLEHVQVIAQDPNINCSRKFSDPGQLNYPSFSILFANKKRVVRYTRTLTNVGDANSIYNVAIEGPPTVSITVKPDKLVFQKVLEKKRYTVTFVSKKRNAIKAASGSITWSNSQHQVRSPIAYTWSG 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1493 773 SUPERFAMILY PA domain 411 475 IPR046450 -
Lal17g1493 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Lal17g1493 773 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Lal17g1493 773 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Lal17g1493 773 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Lal17g1493 773 CDD PA_subtilisin_like 359 484 - -
Lal17g1493 773 Pfam Subtilase family 144 595 IPR000209 GO:0006508|GO:0008236
Lal17g1493 773 ProSiteProfiles Serine proteases, subtilase domain profile. 109 625 - -
Lal17g1493 773 Pfam Fibronectin type-III domain 672 768 IPR041469 -
Lal17g1493 773 Pfam Peptidase inhibitor I9 34 113 IPR010259 -
Lal17g1493 773 Gene3D - 642 771 - -
Lal17g1493 773 Gene3D - 353 493 - -
Lal17g1493 773 CDD Peptidases_S8_3 110 591 IPR034197 -
Lal17g1493 773 Gene3D Peptidase S8/S53 domain 144 638 IPR036852 GO:0004252|GO:0006508
Lal17g1493 773 Pfam PA domain 401 472 IPR003137 -
Lal17g1493 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 113 IPR037045 -
Lal17g1493 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 771 IPR045051 -
Lal17g1493 773 SUPERFAMILY Subtilisin-like 112 629 IPR036852 GO:0004252|GO:0006508
Lal17g1493 773 PANTHER CUCUMISIN-RELATED 24 771 - -
Lal17g1493 773 SUPERFAMILY Protease propeptides/inhibitors 33 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1493 Lal-Chr17 16365806 16368478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1493 13 772 Subtilisin-like Serine Gene Family AT2G05920 63.565 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1493 - - jre:109009027 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1493 17 16365806 16368478 Lal17g1493 17 16365806 16368478 ECH
Lal19g1192 19 15338151 15342703 Lal17g1493 17 16365806 16368478 PCT
Lal17g1493 17 16365806 16368478 Lal19g1192 19 15338151 15342703 PCT