Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1490 ATGATGAAAAGTAGTATATGGAAGTACATATTTGGTGGTTGTTATAAGGGTGAGTACCCCTCTGGTAGGTCAAAGAAAGTGGTGGGTACAAAACCAAACTGTTCTCATAGGATATCTCTAACAGATTTGAGTTATCCAAGCTTAACATTTTCAGAGGATCTATCTATTTCTCTAGCAGGGTCTAACCTGCATGTTTTTTCACTTGCTGAACTCAAAACTATCACACAGCACTTTTCTTCAAGCAATTTTCTTGGAGAAGGAGGGTTTGGGCCAGTACATAAGGGTTTCATTGATGACAAGCTTAGGCCTGGTCTTAAAGCTCAACCTGTGGCTGTTAAACTCTTGGACTTGGATGGCTCACAGGGTCATAAAGAATGGTTGACTGAAGTAGTTTTTCTGGGGCAACTAAGGCATCCACACCTTGTGAAGCTTATAGGATATTGTTGTGAAGAAGAACATAGGCTTCTGGTATATGAATATTTACCAAGAGGGAGCTTAGAAAATCAATTATTTAGAAGATTGTCAGCATCATTACCTTGGTCAACAAGAATGAAAATTGTTGTTGGAGCTGCAAAGGGTCTAGCCTTTCTTCATGAAGCAGAGAAACCAGTCATATATAGAGATTTCAAAACATCTAATATTTTGTTAGACTCAGATTACAATGCCAAACTCTCTGATTTTGGATTGGCTAAAGATGGCCCAGAAGGAGATGACACACATGTTTCAACCAGAGTTATGGGTACACAAGGATATGCAGCACCAGAATATGTCATGACAGGTCACTTGACAGCAATGAGTGATGTGTATAGCTTTGGAGTAGTGTTGTTAGAGATCCTAACAGGTAGAAAATCAGTGGACAAAAATCGTCCTCAAAGGGAGCATAACTTAGTGGAATGGGCAAGGCCAATGTTAAATGATTATAGGAAACTTAGTAGGATAATGGACCCTACACTTGAAGGGCAGTTCTCTGAGTTAGGGACTAAAAAAGCAGCAGCATTAGCTTATCAATGCCTTAGCCATAGACCAAGGAGTAGACCATCAATGAGCACAGTGGTTAAGACTCTAGAACCCCTTCAACATTTTCATGATGTTCCAATTGGACTCTTTGTTTATACAGTTCCACTTGATAATACTCAAGTACTAAGACACAAGGATGCTAAAGAACATCATCAACTGCCTAATGAAACAAACACCCAAAATCATCACCATCATCATCATCATCATCATCATCATCGCCGGATTCACCATCATAACAACGCTGCCCATCCGCCTCATCCACTTAAATCGCCGAAGCCGCAATTGCAGTTGCAGAGTGACAAATCAGATAGGGCAAAGAAGAATAATTTAGCATGA 1353 0.3999 MMKSSIWKYIFGGCYKGEYPSGRSKKVVGTKPNCSHRISLTDLSYPSLTFSEDLSISLAGSNLHVFSLAELKTITQHFSSSNFLGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRLSASLPWSTRMKIVVGAAKGLAFLHEAEKPVIYRDFKTSNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLEILTGRKSVDKNRPQREHNLVEWARPMLNDYRKLSRIMDPTLEGQFSELGTKKAAALAYQCLSHRPRSRPSMSTVVKTLEPLQHFHDVPIGLFVYTVPLDNTQVLRHKDAKEHHQLPNETNTQNHHHHHHHHHHHRRIHHHNNAAHPPHPLKSPKPQLQLQSDKSDRAKKNNLA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1490 450 MobiDBLite consensus disorder prediction 400 422 - -
Lal17g1490 450 Gene3D Phosphorylase Kinase; domain 1 42 160 - -
Lal17g1490 450 Pfam Protein tyrosine and serine/threonine kinase 82 355 IPR001245 GO:0004672|GO:0006468
Lal17g1490 450 SUPERFAMILY Protein kinase-like (PK-like) 55 358 IPR011009 -
Lal17g1490 450 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 22 405 - -
Lal17g1490 450 ProSiteProfiles Protein kinase domain profile. 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1490 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lal17g1490 450 PANTHER OS01G0588500 PROTEIN-RELATED 22 405 - -
Lal17g1490 450 MobiDBLite consensus disorder prediction 393 450 - -
Lal17g1490 450 Gene3D Transferase(Phosphotransferase) domain 1 161 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1490 Lal-Chr17 16331707 16333947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1490 23 391 Glycoside Hydrolase AT3G07070 46.154 1.14e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal17g1490 PK_Tyr_Ser-Thr 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1490 - - gmx:100797003 701.434