Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1486 ATGGCTTTAGCCATTTCCTCCACTGCTTTGTTAAGTTTTCCAAACAGAGAAATATGTGAAAAGGGTATTTATGAAAGAACAAAAGCAACATGGTTACAAAGAAGAAGTGTTACAAATGCAACAAAGGGTGTGTCAAGTGTATGTGAACCACTTCCACCAGATAGACCATTATGGTTCCCTGGTTCTTCACCTCCTGAGTGGCTTGATGGAAGTCTTCCTGGTGATTTTGGTTTTGACCCCCTTGGATTAGGGTCTGATGCAGAGTTGCTTAAATGGTTTGCACAAGCAGAACTAATGCATTCAAGATGGGCAATGCTAGGAGTATCAGGAATTCTGGTTCCAGAATTGCTTGAAAAGATTGGTTATGTTGAGAACTTTTCATGGTATGATGCTGGTGCTAGAGAATACTTTGCTGATCCTACAACCTTGTTCATTGTTCAATTAGTCTTAATGGGTTGGGTTGAGGGTAGAAGATGGGCTGATATAGTTAATCCAGGGAGTGTAGACATTGAGCCTAAATTGCCACATAAGACTAACCCAAAGCCAGATGTTGGTTACCCTGGTGGCTTATGGTTTGACCCTATGATGTGGGGAAGAGGGTCACCTGAGCCAGTTATGGTGTTAAGGACTAAAGAGATCAAGAATGGTAGGCTTGCAATGTTGGCTTTTGTTGGCTTTTGCTTCCAAGCTACTTATACAGGACAAGGCCCTCTTGAAAACTTGATGTGGCACGTTGCGGATCCCGGTCACAACAACATTTTCTCGCGGTCCATTCCAACCCGAGCTTCTAACATTTCAAGCTCGGTGCCAATGGCCGCTGTTCACTTCCTCATCATCATCATCATCATTATCCTTATCCCGTTCGCGCTCTCAGCGTCCGAAACCGAGTCCCTCCTGAGACTCAAACAGTCCTTTACCAATGCAGATACCTCTCTATCTTCATGGATCCCAAATGTATCCCCATGTGGAAACTGGATTGGTGTTGTTTGCTTCAAGAACATTATCACTGGTTTGCACCTATCAGATTTAGGCCTCTCTGGAAAAATTGACATTGATGCTCTCATGCAGATTCCAGGCCTACGTACTATAAGCTTTGTTAACAATTCTTTCTCTGGTCCAATGCCTGAATTCAACAAACTCGGCGCGATTAAAGCAATATACTTAACAGACAACCAGTTTTCTGGTCCAATTCCTTTGGAATTTTTCTCGCAATTAGGTTCTTTAAAGAAGGTTTGGTTCTCGAATAATAAGTTTTCAGGGAACATACCTGATTCCTTAAACGAACTCGATTTTCTCAAAGAATTGCACCTTGAGAACAACGAGTTTTCGGGTAAAATACCATCACTCAAGCAACAATTGACATCATTTAGTGTCTCCAATAACAAGTTGGAAGGTATGATACCTGAGAATTTGGTGAGTTATGGGGCTAATTCATTCACAGGGAATGAAAAGCTTTGTGGTAAGCCTTTGGATAGGGCTTGTGAATATTATACTTTGCCAACTGAAGGAGAGGGTAGAGTATATCTTACAGGTTTTGGTATTAAGGTTATTCTGATACTCGTGTTTGGGGTTATTGCGGCTTTGGTATTCTTATCCCTGAAGAATAAGAACCAACCTAAGCATGATTTCAGCATTATCAGCAGGAGTAACAGCAGCATCCACGGGGATCAGGTGGTACAAGTGCATGTACCAAGTTCAAAGAATAGCAAGTTTTCGGAAAATAAAAGCAAAAAGGGTAGTAGCCATGGTGAGCACAAGAGTGAGAGTAAGAGAGCATCCAGCACAAGGGGTGGTAGCATGGGTGATCTTGTTATGGTGAATGATGAAAAGGGTGTGTTTGGTTTGGGAGATTTGATGAAAGCTGCAGCAGAGGTTCTCGGAAATGGCGGGTTGGGTTCGGCATACAAGGCTGCAATGGCAAATGGATTATCTGTGGTGGTGAAGAGAATGAGAGAAATGAATAAGATTGGAAGAGATGTGTTTGATGCTGAGATGAGACAATTTGGAAGGATCAAACACCCTAATATATTGACACCTTTGGCTTATCATTATCGCAGAGAAGAGAAGCTTTTTGTCACAGAATATATGCCAAAAGGAAGCTTGTTATATGTCTTGCATGGTGACAGAGGAACTTGCCATGCCGATCTGAATTGGCCTACCCGATTGAAGATTGTTAAAGGAATTGCACGAGGTTGCGGCTTCCTTTACACGGAATTTTCTAACTATGAACTGCCTCATGGAAACCTCAAGTCTAGCAATATTATGCTAAGTGATGATTATGAACCTCTACTAAGTGAATATGCCTTTTATCCACTAATCAATCCTAGTGCTGTGCAATCAATGTTTGCATACAAAACTTCAGATTATACAGAATACCAGAAAGTATCACAGAAGACTGATGTTTATTGCCTCGGCATCATCATTCTCGAAATCATTACCGGAAAGTTCCCATCTCAGTATCATAGCAATGGAAAGGGTGGTATTGATGTTGTGCAATGGGTATTCAATGCGATTTCTGAGAGAAGAGAAGAAGAATTGATTGATCCAGAGTTAAAAAACGATACAAATTCGCTCAATAAGATGTTGCAGCTTCTCCAAATCGGGGCTGCCTGCATAGAAAGCAACCCCGAACAAAGAATTACAATGAAAGAAGCCATTAGAAGGATAGAGGAAATGCAAGTTTAA 2685 0.4145 MALAISSTALLSFPNREICEKGIYERTKATWLQRRSVTNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDAELLKWFAQAELMHSRWAMLGVSGILVPELLEKIGYVENFSWYDAGAREYFADPTTLFIVQLVLMGWVEGRRWADIVNPGSVDIEPKLPHKTNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQATYTGQGPLENLMWHVADPGHNNIFSRSIPTRASNISSSVPMAAVHFLIIIIIIILIPFALSASETESLLRLKQSFTNADTSLSSWIPNVSPCGNWIGVVCFKNIITGLHLSDLGLSGKIDIDALMQIPGLRTISFVNNSFSGPMPEFNKLGAIKAIYLTDNQFSGPIPLEFFSQLGSLKKVWFSNNKFSGNIPDSLNELDFLKELHLENNEFSGKIPSLKQQLTSFSVSNNKLEGMIPENLVSYGANSFTGNEKLCGKPLDRACEYYTLPTEGEGRVYLTGFGIKVILILVFGVIAALVFLSLKNKNQPKHDFSIISRSNSSIHGDQVVQVHVPSSKNSKFSENKSKKGSSHGEHKSESKRASSTRGGSMGDLVMVNDEKGVFGLGDLMKAAAEVLGNGGLGSAYKAAMANGLSVVVKRMREMNKIGRDVFDAEMRQFGRIKHPNILTPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTCHADLNWPTRLKIVKGIARGCGFLYTEFSNYELPHGNLKSSNIMLSDDYEPLLSEYAFYPLINPSAVQSMFAYKTSDYTEYQKVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGIDVVQWVFNAISERREEELIDPELKNDTNSLNKMLQLLQIGAACIESNPEQRITMKEAIRRIEEMQV 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1486 894 Gene3D Chlorophyll a/b binding protein domain 65 250 - -
Lal17g1486 894 MobiDBLite consensus disorder prediction 571 592 - -
Lal17g1486 894 Gene3D Ribonuclease Inhibitor 291 450 IPR032675 -
Lal17g1486 894 SUPERFAMILY Protein kinase-like (PK-like) 624 889 IPR011009 -
Lal17g1486 894 Gene3D Transferase(Phosphotransferase) domain 1 697 894 - -
Lal17g1486 894 Pfam Leucine rich repeat N-terminal domain 292 330 IPR013210 -
Lal17g1486 894 SUPERFAMILY L domain-like 292 533 - -
Lal17g1486 894 PANTHER LRR RECEPTOR-LIKE KINASE 275 894 - -
Lal17g1486 894 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 275 894 - -
Lal17g1486 894 SUPERFAMILY Chlorophyll a-b binding protein 54 257 - -
Lal17g1486 894 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Lal17g1486 894 Pfam Protein kinase domain 624 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1486 894 MobiDBLite consensus disorder prediction 564 601 - -
Lal17g1486 894 Gene3D Ribonuclease Inhibitor 452 491 IPR032675 -
Lal17g1486 894 ProSiteProfiles Protein kinase domain profile. 620 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1486 894 Gene3D Phosphorylase Kinase; domain 1 626 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1486 Lal-Chr17 16293672 16299113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1486 271 894 Receptor kinase-like Gene Family AT3G42880 49.922 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal17g1486 Pkinase 2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1486 - - gmx:100816925 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1486 17 16293672 16299113 Lal17g1486 17 16293672 16299113 ECH