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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal17g1483
ATGTCTAGTTCATCGGAGTACTCAGAGTTTTCCGGCCAGAAGCCGGTGAGGTTGCCGGAGAAAACAAGTTTCTCTCATACTTGTAGTCTATTGAGTCAATACATGAAGGAGAAGGGTAGTTTTGGAGATCTTACCATCGGGATGACATGTAACAAAGAACAAAGTGGGTCACCTGAGACATCTTGTCAATCTGCAACAACCATGAATTTGTTTCCTACTAAAGAAAATAACATAGCACCAAAGAACCTGATAGCTCTGGATTTGCTCTCTCCACAAGCTGCTTTTCGCCCCCATCTTCCGGCCCAAGAGATCAATTCTAGTGTAATTGTGCCAGTGAGCAAGGGATCTAAAGCTGCACAATTGACAATCTTTTATGCTGGACAAGTTATTGTTTTCAATGATGTTCCGGCCGATAAAGCCGACGAGCTAATGTCCTTTGCCAGCAAAGGAGTCTCCCAAAGCCAGAACCATTTTGTTCAAACATGCACTAGTAGCCAACCTTCATTTCCTCATAATTTAGTCAGAACTTTTGCTGATTCAATTACTCCTAATGTGAATATCATCTCTTGTACCGACACCAATTTGATTCTTCGACAACCTCAACCATCATCTAGACCTGTTGTTTGTGATCTACCAATTGCTAGGAATGCTTCACTTCATAGGTTCTTGGAGAAGAGAAAAGATAGAATTGCAGCCAAAGCACCATATCAAATGAAAAATCACATTTTTTCTGCTAATAAGCCAATTGAATCTATGTCATGGCTTGGCTTGGGAGCTAAATCATCTCAACCCTGA
795
0.4126
MSSSSEYSEFSGQKPVRLPEKTSFSHTCSLLSQYMKEKGSFGDLTIGMTCNKEQSGSPETSCQSATTMNLFPTKENNIAPKNLIALDLLSPQAAFRPHLPAQEINSSVIVPVSKGSKAAQLTIFYAGQVIVFNDVPADKADELMSFASKGVSQSQNHFVQTCTSSQPSFPHNLVRTFADSITPNVNIISCTDTNLILRQPQPSSRPVVCDLPIARNASLHRFLEKRKDRIAAKAPYQMKNHIFSANKPIESMSWLGLGAKSSQP
264
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal17g1483
264
Pfam
tify domain
117
148
IPR010399
-
Lal17g1483
264
PANTHER
PROTEIN TIFY 4A-RELATED-RELATED
20
258
IPR040390
-
Lal17g1483
264
Pfam
Jas motif
212
237
IPR018467
-
Lal17g1483
264
SMART
tify_2
114
149
IPR010399
-
Lal17g1483
264
PANTHER
PROTEIN TIFY 10A
20
258
-
-
Lal17g1483
264
ProSiteProfiles
Tify domain profile.
114
149
IPR010399
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal17g1483
Lal-Chr17
16279601
16282714
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal17g1483
1
260
Tify Gene Family
AT1G19180
41.328
2.42e-49
161
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
Tify
Lal17g1483
tify
1e-16
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal17g1483
K13464
-
gmx:100801449
338.191
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lal17g1483
17
16279601
16282714
Lal17g1483
17
16279601
16282714
ECH
Lal17g1483
17
16279601
16282714
Lal21g1182
21
14630503
14633553
LSH
Lal17g1483
17
16279601
16282714
Lal4g1510
4
19273028
19276359
LSH
Lal14g1638
14
16747697
16752164
Lal17g1483
17
16279601
16282714
PCT
Lal7g1044
7
16583394
16585491
Lal17g1483
17
16279601
16282714
PCT
Lal19g1186
19
15294520
15297914
Lal17g1483
17
16279601
16282714
PCT
Lal17g1483
17
16279601
16282714
Lal14g1638
14
16747697
16752164
PCT
Lal17g1483
17
16279601
16282714
Lal7g1044
7
16583394
16585491
PCT
Lal17g1483
17
16279601
16282714
Lal19g1186
19
15294520
15297914
PCT
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