Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1477 ATGCAAACCCATTTCACACTCTCACTCTCTACTCTCCTTCTCTATTTCCTCATCATCTTCACATTTTTCTCCTCTTCTACTACTGCAACATTACCATCAAATAACCACAATGAACCACAAGATCTGATCCATTCCTCCTGCATCCACTCCATGTACCCGAGGTTATGTCTCCGAACCCTATCCAACTATGTAGGACCCACCAACACCACTTTATATGTAGCCCAGGCTGCCCTTAAAGTGAGTCTGGCGCATGCTGCTAGAGCCTCGAAATATCTCAAGACTCTGTCAGCAGCAGCGCCAGACTCGTCAGGACAAAGTCCTACTAAGAAGAGGCAGCGAGTGGCGCTGAAAGACTGCGTGGAGCAGATGGCGGACTCGGTGGATGAGCTTAGGAAGAGCCTTGAGGAGCTCTATCACCTGCGACCGGAGACATTCCGGTGGCAGATGAGTAATACTCAGACATGGGTAAGTGCCGCCATCACAGATGGCGACACTTGTCTCGATGGGTTTGTTAGTAATGGTGGTGACAATGATGGGAAGGTGAAGCGAGAGGTGAAGCGGAGGGTCACCGACGTAGCAATGGTTACTAGTAATGCGCTTTACATGATCAATCGCTTGGGTCAAGGTGATGCAAGAAAGGGAAAACATCGTCCCGGTGGCGGTTCCGGTTGGAATAATTAA 681 0.4949 MQTHFTLSLSTLLLYFLIIFTFFSSSTTATLPSNNHNEPQDLIHSSCIHSMYPRLCLRTLSNYVGPTNTTLYVAQAALKVSLAHAARASKYLKTLSAAAPDSSGQSPTKKRQRVALKDCVEQMADSVDELRKSLEELYHLRPETFRWQMSNTQTWVSAAITDGDTCLDGFVSNGGDNDGKVKREVKRRVTDVAMVTSNALYMINRLGQGDARKGKHRPGGGSGWNN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1477 226 Pfam Plant invertase/pectin methylesterase inhibitor 41 201 IPR006501 GO:0004857
Lal17g1477 226 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 207 IPR035513 -
Lal17g1477 226 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 206 IPR035513 -
Lal17g1477 226 CDD PMEI-like_3 45 206 - -
Lal17g1477 226 Coils Coil 120 140 - -
Lal17g1477 226 PANTHER PECTINESTERASE INHIBITOR 3 14 208 - -
Lal17g1477 226 SMART PMEI_2 38 202 IPR006501 GO:0004857
Lal17g1477 226 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 208 - -
Lal17g1477 226 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1477 Lal-Chr17 16189632 16190312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1477 42 210 Carbohydrate Esterase AT3G14310 32.558 7.20e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1477 - - aip:107634498 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1477 17 16189632 16190312 Lal17g1477 17 16189632 16190312 ECH