Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1476 ATGAGTTCTATTTCCATTACCATGTCTCCATTTTTTATTCTCATCATTCTATCATTAATATATCTATCTTCTTCAACATCCTTAGATTCTAAAAGTACTTACATTGTTCATATCAAACATCAAAACAAACCAGACATATATTCAACCCATCATGAATGGTACACCTCCACTCTCTCTTCTCTATCCACAATCGACTTCGACTCCAACCCCTTACTCTACACCTACACCACTGCATATAACGGTTTTTCCGCCTCCCTCACTTCTCAACAAGCTGATGAACTTCTCAAATCCGATTCCGTGATCGGAATCTACCAGGATACTCTCTATCAACTCCACACCACTCGTACCCCTGAGTTCTTAGGACTCCAAACACGCTCAGGGTTACCCACAGGACTTGTTAATGAAACCCTAAACAAGGGTTTGCATGATATCATCATAGGAGTTCTCGACACCGGAGTGTGGCCGGAATCTAAAAGCTTCGATGATTCCGGAATGCCAGATATACCTAAACGATGGCGTGGAGAATGTGAAAACGGAAAAGATTTTGCTTCCTCTTTGTGTAATAAGAAGCTCATTGGTGCTAGAGCCTTCTATAAAGGCTATGAGACTGTTATAGGGAGTAAGATAAAAAATAATTCCACTAGAGATACAGAGGGTCATGGGACCCATACTGCGAGCACTATCGCTGGGTCACATGTGGCTAATGCTAGCTTTTTTGGTTATGCCAGCGGCATTGCTCGTGGTATGGCCCCACAAGCACGTGTAGCAGCCTATAAGGTTTGCTGGCCGGTCGGCTGTTTTGCTTCTGACATTCTTGCTGGCATGGAACGTGCCATCGAGGATGGCGTTAATGTATTATCCCTCTCAATCGGTGGAACCTCAGATCCTTATTTTAACGATACACTCGCGATTGGAGCGTTTGCCGCCATGAAGAGAGGGATATTTGTGTCTTGTTCTGCTGGGAATGGTGGTCCCACACCGAAATCGCTTTCCAACGTGGCACCTTGGATTATGACAGTTGGGGCTGGGACCTTGGACCGTGATTTTCCATCTTATGTGGTTCTTGGGAATAAAAATAAGTTCACTGGTGTTTCATTTTATAGTGGGAATGGGATTGGGAGTGAACCAGTGGGTTTGGTTTATAACAATGGGGTGAAGTCGAACCAATCGGCTAGCCTGTGTACACCCGGTTCACTTGATCCGAAATTGGTTCGTGGGAAGGTGGTGTTTTGTGACAGGGGAAGTAATGCACGATTGGAGAAAGGACTGGTAGTGAAGAAAGCTGGTGGGGTTGGGATGATATTGGCAAACACAGCGGAGACTGGAGAGGAGCCTGTGGCGGACAAACATGTGTTGCCAGCTGTGGCAGTGGGGAAAATAGCTGGAGATAAGATACGGGAGTATGTGAGGTTAGATCCAAATCCGACGGCGATTTTGAGTTTTGGTGGGACGGTTTTGGATATTAAGCCAGCACCATTGGTGGCATCGTTTAGTTCAAGAGGGCCAAATAATTTGACGCCTCAGATTTTGAAACCAGATATTATTGGTCCCGGGGTTAATATTTTGGCTGGGTGGACAGGTGCTATTGAACCATCTACCTTGCCTACGGATACCAACTTATCACCATTCTATCTTTTGTCAGGTACATCTATGTCTTGTCCACACATAAGTGGTTTGGCTGCATTGATAAAAGCAGCCCATCCAAAGTGGAGTCCTAGTGCAATCAAATCTGCACTAATGACAACAACATATACCCTTGATAACACAAACACCCCACTCCATGAAGCCTCAGTAGGAGCCATTTCCACTCCCTGGGATCATGGCGCCGGCCATGTCGACCCACAGAAAGCACTCTCTCCTGGCCTTGTCTACGACGCATCAGCCAATGACTACATCACATTCTTGTGCTCCTTGAACTACTCCCTGAAGCACGTTCAAGTGATTGCTCAGGACCCTAATATCAATTGTTCCAGGAAATTCTCTGACCCTGGCCATCTCAATTACCCATCATTCTCAATCTTATTTGCAAGAAAGAAAAGGGTTGTCCGCTATACGCGTACCTTGATGAATGTTGGTGATGCCAATTCCGTCTATAATGTGACTGTTGAAGGGCCACCGGCAGTAAGTATAACTGTAAAACCTGATAAGCTTGTGTTTCAGAAAGTACTTGAAAAGAAAAGGTACACTGTGACATTTGTGTCTAGGAAACGTGATGCTATAAAGGCTACATTTGGTAGCATCACATGGAGCAATTCACAACACCAAGTTAGGAGCCCAATTGCTTATACTTGGTCAGGATAG 2301 0.4498 MSSISITMSPFFILIILSLIYLSSSTSLDSKSTYIVHIKHQNKPDIYSTHHEWYTSTLSSLSTIDFDSNPLLYTYTTAYNGFSASLTSQQADELLKSDSVIGIYQDTLYQLHTTRTPEFLGLQTRSGLPTGLVNETLNKGLHDIIIGVLDTGVWPESKSFDDSGMPDIPKRWRGECENGKDFASSLCNKKLIGARAFYKGYETVIGSKIKNNSTRDTEGHGTHTASTIAGSHVANASFFGYASGIARGMAPQARVAAYKVCWPVGCFASDILAGMERAIEDGVNVLSLSIGGTSDPYFNDTLAIGAFAAMKRGIFVSCSAGNGGPTPKSLSNVAPWIMTVGAGTLDRDFPSYVVLGNKNKFTGVSFYSGNGIGSEPVGLVYNNGVKSNQSASLCTPGSLDPKLVRGKVVFCDRGSNARLEKGLVVKKAGGVGMILANTAETGEEPVADKHVLPAVAVGKIAGDKIREYVRLDPNPTAILSFGGTVLDIKPAPLVASFSSRGPNNLTPQILKPDIIGPGVNILAGWTGAIEPSTLPTDTNLSPFYLLSGTSMSCPHISGLAALIKAAHPKWSPSAIKSALMTTTYTLDNTNTPLHEASVGAISTPWDHGAGHVDPQKALSPGLVYDASANDYITFLCSLNYSLKHVQVIAQDPNINCSRKFSDPGHLNYPSFSILFARKKRVVRYTRTLMNVGDANSVYNVTVEGPPAVSITVKPDKLVFQKVLEKKRYTVTFVSRKRDAIKATFGSITWSNSQHQVRSPIAYTWSG 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1476 766 CDD PA_subtilisin_like 352 477 - -
Lal17g1476 766 Pfam Fibronectin type-III domain 666 761 IPR041469 -
Lal17g1476 766 Gene3D - 346 486 - -
Lal17g1476 766 ProSiteProfiles Serine proteases, subtilase domain profile. 119 618 - -
Lal17g1476 766 PANTHER CUCUMISIN-RELATED 23 764 - -
Lal17g1476 766 Pfam Peptidase inhibitor I9 33 112 IPR010259 -
Lal17g1476 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Lal17g1476 766 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Lal17g1476 766 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Lal17g1476 766 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Lal17g1476 766 Gene3D Peptidase S8/S53 domain 143 631 IPR036852 GO:0004252|GO:0006508
Lal17g1476 766 CDD Peptidases_S8_3 109 584 IPR034197 -
Lal17g1476 766 Pfam Subtilase family 143 591 IPR000209 GO:0006508|GO:0008236
Lal17g1476 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 764 IPR045051 -
Lal17g1476 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 112 IPR037045 -
Lal17g1476 766 Pfam PA domain 391 465 IPR003137 -
Lal17g1476 766 Gene3D - 635 764 - -
Lal17g1476 766 SUPERFAMILY Subtilisin-like 111 622 IPR036852 GO:0004252|GO:0006508
Lal17g1476 766 SUPERFAMILY Protease propeptides/inhibitors 32 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1476 Lal-Chr17 16166037 16168689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1476 30 765 Subtilisin-like Serine Gene Family AT2G05920 63.795 0.0 973
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1476 - - csv:101209781 1009.98