Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1473 ATGGCACTATGCAATCGAGTCAGATCAGAAATCTTCAACAAATTAGGGTTTGTCGCTTCTCAGAGATCCAATCTTCAACGATCCCTCATTTCTCCTTCCACTTCCCTGGCCTCCAGGAATTATGCTGACCTTCCGGGCCAAAAGAAGGAGAAGAAAGTTAAGATCCCGAAGGCTTTGTATGGTGGTTCAGGAAACTATGCCTCTGCTTTGTACATTGCAGCAGTGAAGGCTAATGCAGTGGAAAAGGTTGAGTCTGAGCTTCTTGCATTTGCTGAGGCAGTAAAGAACAGTGCTAAATTTTCAGAGTTTACAAAGGACCCATCTGTTGCTAAGGATATTAGAGTAAAGGCCATCCAGGAGATTTGTGGTGAAGCTAAATTTTCAGATGTTACAAAGAATTTCCTTGTTATCGTCGCTGAGAATCTGAGGCTTAAAAACATTGATACCATTGCAAAGAGGTTTGTGGAGTTGTCAATGGCATATAAGGGAGAAGTGAAAGCCACTGTGACCACTGTCTTTCCTCTCCCCCCTGAAGAGGAGAAGGCGCTGAAAGATACTCTTCAGGAGATGTTAGGTACCGGGGCAAAGGTGTATCTTGAGCAGAAGATTGATCCAAGCATCCTTGGTGGTATAGTGCTGGAATTTAGCCAGAAGGTCTTTGACATGTCTATTAAGACTAGGGCACAACAGATGGAGAGGATCCTCCGAGAGCCCGTAAATATTGGCAACATCTAG 735 0.4422 MALCNRVRSEIFNKLGFVASQRSNLQRSLISPSTSLASRNYADLPGQKKEKKVKIPKALYGGSGNYASALYIAAVKANAVEKVESELLAFAEAVKNSAKFSEFTKDPSVAKDIRVKAIQEICGEAKFSDVTKNFLVIVAENLRLKNIDTIAKRFVELSMAYKGEVKATVTTVFPLPPEEEKALKDTLQEMLGTGAKVYLEQKIDPSILGGIVLEFSQKVFDMSIKTRAQQMERILREPVNIGNI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1473 244 Pfam ATP synthase delta (OSCP) subunit 64 235 IPR000711 GO:0015986|GO:0046933
Lal17g1473 244 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 31 237 - -
Lal17g1473 244 Hamap ATP synthase subunit delta [atpD]. 58 237 IPR000711 GO:0015986|GO:0046933
Lal17g1473 244 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 197 216 IPR020781 GO:0015986|GO:0016020|GO:0046933
Lal17g1473 244 PANTHER ATP SYNTHASE DELTA CHAIN 31 237 IPR000711 GO:0015986|GO:0046933
Lal17g1473 244 Gene3D - 61 155 IPR026015 -
Lal17g1473 244 PRINTS ATP synthase delta subunit signature 62 81 IPR000711 GO:0015986|GO:0046933
Lal17g1473 244 PRINTS ATP synthase delta subunit signature 132 143 IPR000711 GO:0015986|GO:0046933
Lal17g1473 244 PRINTS ATP synthase delta subunit signature 143 157 IPR000711 GO:0015986|GO:0046933
Lal17g1473 244 PRINTS ATP synthase delta subunit signature 195 210 IPR000711 GO:0015986|GO:0046933
Lal17g1473 244 PRINTS ATP synthase delta subunit signature 210 228 IPR000711 GO:0015986|GO:0046933
Lal17g1473 244 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 63 163 IPR026015 -
Lal17g1473 244 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 65 235 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1473 Lal-Chr17 16107631 16111176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1473 87 244 Primary Pumps ATPases AT5G13450 56.329 7.02e-63 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1473 K02137 - gmx:100790990 376.326