Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal17g1462 | ATGTGTCTTCCATTTGGTGCTAATGCTAGTACTTATAATAATAATACAGTGAGATCAGAGTTTCTTAAAGTTTCTCCTTCTGAATTTGTTGGTTCTGTTAATGAAGTTGTTGATGTTTTGCAAGATGTTACTTCCATTCTCTCTGAGTTTGCCAATGTTTTTGGAGATTTTAGGCTTTCAAATGCAGTTTCTGATTGTCTTGATTTGCTTGATTTGTCTTCTGAACAACTTAGTTGGTCTGTCTCAGCTACTCAGAGTCCTAAAGGCAAGCATAATAGTACTGGGAACCTAAGTTCAGATTTAAGGACATGGCTAAGTGCTTCACTAACAAATCCAGAGACATGCATGGATGGATTTGAAGGTACAAACAACATTGTTAAGGGTCTAGTATCAAATGGTCTTGTCCAAATAATATCATTGGTCCAACAACTTTTAACCCAAGTGAACCCTGTTATGGGTCATTTCCCTTTCACAAATAAGGGTCAATTCCCTGCATGGGTTAAACCAAGGGATAGAAAAAAGTTACTTGAACAAAATGTGGTTATTGTGGATACTATAGTTGCTGCTGATGGAAGTGGAAATTATACTAAGGTTATGGATGCTGTGAAAAAAGCACCTAACTATAGCATGAGAAGGTTTGTGATATATGTGAAGAAGGGTATTTATAATGAGAATGTTGAGATTAAGAAGAAAAAATGGAATCTTATGATTATTGGAGATGGCATGAATGAATCTATGATCACTGGAAATAGAAGTTTCATTGATGGTTGGACAACATTCAGATCAGCTACCTTTGGTAACAACACACTATCCCTACTCTTGTTTTAG | 828 | 0.3587 | MCLPFGANASTYNNNTVRSEFLKVSPSEFVGSVNEVVDVLQDVTSILSEFANVFGDFRLSNAVSDCLDLLDLSSEQLSWSVSATQSPKGKHNSTGNLSSDLRTWLSASLTNPETCMDGFEGTNNIVKGLVSNGLVQIISLVQQLLTQVNPVMGHFPFTNKGQFPAWVKPRDRKKLLEQNVVIVDTIVAADGSGNYTKVMDAVKKAPNYSMRRFVIYVKKGIYNENVEIKKKKWNLMIIGDGMNESMITGNRSFIDGWTTFRSATFGNNTLSLLLF | 275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal17g1462 | 275 | Pfam | Pectinesterase | 184 | 268 | IPR000070 | GO:0030599|GO:0042545 | |
Lal17g1462 | 275 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 32 | 140 | IPR035513 | - | |
Lal17g1462 | 275 | SMART | PMEI_2 | 12 | 147 | IPR006501 | GO:0004857 | |
Lal17g1462 | 275 | Gene3D | - | 180 | 272 | IPR012334 | - | |
Lal17g1462 | 275 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 21 | 149 | IPR035513 | - | |
Lal17g1462 | 275 | CDD | PMEI-like_4 | 13 | 151 | - | - | |
Lal17g1462 | 275 | ProSitePatterns | Pectinesterase signature 1. | 209 | 228 | IPR018040 | - | |
Lal17g1462 | 275 | PANTHER | PECTINESTERASE | 23 | 266 | - | - | |
Lal17g1462 | 275 | PANTHER | PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED | 23 | 266 | - | - | |
Lal17g1462 | 275 | Pfam | Plant invertase/pectin methylesterase inhibitor | 56 | 132 | IPR006501 | GO:0004857 | |
Lal17g1462 | 275 | SUPERFAMILY | Pectin lyase-like | 184 | 267 | IPR011050 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal17g1462 | Lal-Chr17 | 15995531 | 15999817 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal17g1462 | 17 | 266 | Carbohydrate Esterase | AT3G43270 | 52.075 | 7.90e-96 | 290 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal17g1462 | K01051 | - | gmx:100801813 | 364.77 |