Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1425 ATGGAGGAAGTTGACGTTGAAGGTGGTGGAGAAGACGGTTTTCGCGTTCGTAAATATCGTCCGGTGTTGGCAAACGATCGCGCGGTTCTCGAAATGTCTCCGGTTGATCCTGGATCCTCTTCTGCTTCTGCGTTTTCAGATCAACCTCCTAATCTCAGAAAAATAAATGTCGGTTCTGGTGTCAATGGGAGTTCTGGTGCCAAAGACGGGAATGCTCCTCGTCAACCACAGCCTAATGGAACCCAACAAGAATCCAAACTAGAATTATTTGGTTTTGATTCTCTCGTCAACATTCTTGGTCTAAAAAGCATGACTGGTGAGCAAGTTGCACCACCATCTAGTCCTAGAGATGGTGAAGATATTCCCCCCATCATTGCTGGGCAGCCTGACAAAATGGGTACAATGATGGGTGTATTCATTCCTTGTTTACAGAGCATTTTGGGCATCATTTACTACATCCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGGGTCATTGTTGCTTGTTGCATTATGTGGCATATGTACTTTCCTTACATCAATATCATTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATATTACCTCATTGGTCGTGCCCTTGGTCCAGAAGTTGGTGTTAGCATTGGTTTATGCTTCTTCCTTGGGAATGCAGTTGCTGGAGCACTTTACGTATTGGGAGCTGTGGAAACATTTTTGAAAGCAGTTCCTGGTGCTGGGATTTTTAAAGAGACTATCACACAAGTTAATGGAACCGCAGTCGCGCAACCGATACAGAGTCCAAGCTCTCATGATCTGCAAATTTATGGGATTGTTGTGACTATTATTTTATGTTTTATTGTCTTTGGAGGAGTAAAGATGATAAATCGAGTTGCACCTGCTTTTCTCATACCCGTTTTGTTCTCATTGATCTGCATATTTTTGGGAGTTATTTTGGCTAGAAAGGATCATCCTACAGAGGGAGTTACTGGGTTGAGTTTGGAGACAATTAAAGAAAATTGGAGTTCTGATTATCAAAAAACTAATGATGCTGGAATTCCAGAAACTGATGGCTCTGTAACCTGGGATTTCAATTCATTGGTAGGCCTTTTTTTCCCAGCTGTGACGGGAATAATGGCAGGTTCTAATCGATCTTCCTCCCTGAAAGATACTCAGCGATCAATTCCTGTTGGAACATTAGCTGCTACTCTTGTAACTTCTGCTATGTATCTTGTTTCTGTGGTTTTGTTTGGTGCTGTTGCCAGCAGAGAGAAGCTTTTAACAGACAGGCTACTTACAGCTACAATAGCCTGGCCTTTTCCTTCATTAATTAAAATTGGTATTATTCTTTCAACCATGGGTGCTGCTCTTCAGAGCCTGACTGGTGCCCCCCGTCTGCTTGCTGCAATAGCCAATGATGATATTTTACCTATTCTGAACTATTTTAAAACTACAGATAGCAGTGAGCCTCATGCTGCTACCTTTTTCACCGCTTTTCTATGTATTGGGTGTGTCATTATTGGGAATCTGGATCTTATCACTCCAACTGTAACTATGTTTTTCCTTCTATGTTATACTGGTGTCAACTTATCCTGCTTCCTTCTCGATCTTCTCGATGCCCCTAGTTGGCGTCCTCGGTGGAAATTTCACCATTGGAGCCTGTCTCTTGTAGGAGCATTACTTTGCATAGTGATCATGTTCCTGATTTCTTGGTCATTCACTGTCGTGTCTTTGGCCCTTGCAAGCCTTATATATAAGTATGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGATGGCTTCAAAAGTGCTTATTTCCAACTAGCACTTCGTAGCCTTCGGTCGCTGGGAGCAAACCAAGTGCACCCGAAGAATTGGTATCCAATTCCATTAGTATTTTGCCGACCCTGGGGCAAACTGCCAGAAAATGTTCCCTGCCATCCCAAGCTTGCAGACTTTGCTAACTGTATGAAAAAGAAGGGTCGAGGAATGTCCATATTTGTCTCTATATTAGATGGAGACTATCATGAATGCGCTGAAGATGCCAAGGCTGCGTGTAAGCAACTCAGTACCTACATTGATTACAAGAATTGTGAAGGTGTAGCTGAGATTGTTGTAGCCCCAAATATGTCTGAAGGCTTTCGAGGCATCATTCAGACGATGGGCCTTGGCAATCTCAAGCCGAACATTGTGGTGATGCGTTACCCAGAAATCTGGCGTCGGGAGAACTTGACAGAAATCCCTGCCACCTTTGTCGGGATAATTAATGACTGCATTGTTGCTAACAAGGCAGTAGTTATAGTGAAGGGTCTTGATGAATGGCCTAATGAGTACCAGAAACAGTATGGAACAATTGATTTGTATTGGATTGTTAGAGATGGTGGTCTCATGCTGCTTCTCTCTCAGCTGCTTCTTACCAAGGAGAGCTTCGAAAGTTGCAAGATTCAGGTATTCTGTATTGCAGAAGACGATGCAGATGCAGACGGGCTGAAAGCAGATGTGAAAAAATTCCTTTATGATCTTCGGATGCAAGCAGAAGTCTTTGTCATAACCATGAAATGGGATGCACAAACGGATGGTGGGTCTCCGCAAGACGAATCACTGGAAGCATTTACTAGTGCTCAACAAAGGATTGATGATTATTTGACCCAAATGAAAGCTGCAGCAGAGAGAGACACTACGCCTCTAATGGCAGACGGTAAGACAGTCGTAGTGAACGAGAAGCAGGTCGAGAAGTTTCTTTACACAACGCTAAAGCTCAATTCGACAATTTTGAGATACTCGAGAATGGCTGCTGTTGTATTGGTAAGTCTCCCTCCACCTCCACTCAACCACCCCGCGTATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAATGTACCCAGGATTTTGCTTGTCAGAGGCTACCGCAGAGACGTTTTGCTTTCCTGCAATAAGCTAGTTTACAATTTTGATAGTTACAAAACCCTTGTAGTCATGGTCTCAAAGAAGCATAATTTTACAAATTTCATATTTTATCTTTCAATCAACAAG 3033 0.4322 MEEVDVEGGGEDGFRVRKYRPVLANDRAVLEMSPVDPGSSSASAFSDQPPNLRKINVGSGVNGSSGAKDGNAPRQPQPNGTQQESKLELFGFDSLVNILGLKSMTGEQVAPPSSPRDGEDIPPIIAGQPDKMGTMMGVFIPCLQSILGIIYYIRFSWIVGMAGIGGSLLLVALCGICTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPGAGIFKETITQVNGTAVAQPIQSPSSHDLQIYGIVVTIILCFIVFGGVKMINRVAPAFLIPVLFSLICIFLGVILARKDHPTEGVTGLSLETIKENWSSDYQKTNDAGIPETDGSVTWDFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLVTSAMYLVSVVLFGAVASREKLLTDRLLTATIAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKTTDSSEPHAATFFTAFLCIGCVIIGNLDLITPTVTMFFLLCYTGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLVGALLCIVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKAACKQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEDDADADGLKADVKKFLYDLRMQAEVFVITMKWDAQTDGGSPQDESLEAFTSAQQRIDDYLTQMKAAAERDTTPLMADGKTVVVNEKQVEKFLYTTLKLNSTILRYSRMAAVVLVSLPPPPLNHPAYFYMEYMDLLLENVPRILLVRGYRRDVLLSCNKLVYNFDSYKTLVVMVSKKHNFTNFIFYLSINK 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1425 1011 MobiDBLite consensus disorder prediction 36 83 - -
Lal17g1425 1011 Gene3D Amino acid/polyamine transporter I 130 595 - -
Lal17g1425 1011 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 11 974 IPR004842 GO:0006811|GO:0015377|GO:0016021
Lal17g1425 1011 Pfam Amino acid permease 137 613 IPR004841 GO:0016020|GO:0055085
Lal17g1425 1011 MobiDBLite consensus disorder prediction 30 83 - -
Lal17g1425 1011 TIGRFAM 2a30: K-Cl cotransporter 75 974 IPR004842 GO:0006811|GO:0015377|GO:0016021
Lal17g1425 1011 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 11 974 - -
Lal17g1425 1011 Pfam Solute carrier family 12 779 974 IPR018491 GO:0006811|GO:0016020|GO:0022857
Lal17g1425 1011 Pfam Solute carrier family 12 647 768 IPR018491 GO:0006811|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1425 Lal-Chr17 15695003 15718266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1425 132 974 Inorganic Solute Cotransporters AT1G30450 83.649 0.0 1459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1425 K14427 - gmx:100795205 1693.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1425 17 15695003 15718266 Lal4g1439 4 18566961 18580556 LSH