Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1387 ATGTTGATCGTTAAAGAAGGTAGTAGACCACCATGGGTGAGTTTAGGAGCTGCTATTTGGGTTCAAATTGCTTCTGGAAACACTTTCACTTTCCCTCTTTATTCTCATTCTTTGAAATCTGTTCTTGGTTTCAATCAACGTCAAGTTACTCTTCTTGGTGTTGCTAATGATATTGGTGAAAATGTTGGTCTTCTTCCTGGTCTTGCTTGTAACAAATTCCCTCCTTGGTTTCTTCTTCTCATTGGTTCTCTTGCTTCTTTCATTGGTTATGGTATTCTTTGGCTTTCTATTTCTCGCACTCTTCAATCACTTCCTTACTTATTGCTATGGTTTGCACTTGTTATTGCTTCCAACAGTAGTGCATGGTTAACCACAGCAGTTCTTGTAACCAACATGAGAAATTTCCCTGTTAGTAGAGGCACAGTTGCAGGAATCCTGAAAGGGTATGGGGGCCTTAGTGCTGCAGTTTTTACTGAAATATACAGCATAGTGCTTCATAATTCTTCTTCCAAGTTTCTGTTGCTCCTTGCCATTGGTATTCCTGTTATTTGCTTCAGTATGATGTTTCTTGTTAGGCCTTGTACCCCAGCTACTGGTGATGACTCTATAGAAAAGTGGCATTTTCTATTTATCCAAGGTTCTAGCGTGGTCTTGGGTTTATATCTTCTTGCAACTACAATATTTGGTAACATTGTTACATTTAGTGGTACAGTTTCCTATATTTTGGTGGCTGTGATGATTCTGCTTCTCATGGCTCCACTTGCTGTCCCTATAAAGATGACACTGTTTCCTAGGAGAGCTTCAAATTCAAACTCGCCTGAGCAACGAGTAGGATCTTCTGACTGTCCCACTCAACGGAAAGATGATAACACTGAGCCGCTGCTAGCATCTTCATCAGCAGCATCCCTTGGAAGTTTTTATGATCAGGATGATTCATCTGAGGTTGCTATGCTTCTTGCTTTGGGTGAGGGAGCCGTAAAGCAAAAGAAGAGAAGGCCTAAACGTGGGGAAGATTTTAAGTTTACCGAGGCTGTGATAAAAGCTGATTTTTGGCTTCTATTTTTGGTTTTCTTTGTCGGTGTTGGCACTGGGGTTACAGTTCTCAATAATCTAGCTCAAATAGGTATAGCACAAGGGGAGGAAGATACCACAACCTTACTGTCAATTTTCAGCTTTTGCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACAATCCCAAGGACATTCTTATTGACATGCACACAGACAATTATGCTCATCGTATACCTTCTGTTTGCCTTTGCCATCAAGGGGACCCTTTATCCTTCAATTGCATTTCTTGGTGTCTGCTACGGAGTGCAAGTTTCTGTGATGCTCCCGACTGTTTCCGAGCTCTTTGGTTTGAAGCACTTTGGCGTATTGAGCAACTTTATGTCATTGGGGAATCCACTTGGTGCAACCCTTTTCTCAGCTATGCTAGCCGGGAATATATATGATAGTGAGGCAGCAAAGCAGATAGGACTCATTGATCCCAGTCTTTCCTGCCTGGGTCCGAGTTGCTTTAAGCTGACCTTTTTCATTCTATCGGGTGTGTGTGCTGTGGGAATCTTCTTTAGCATTATCCTGACTTTGAGAATTAAGCCCGTTTACCAAATGCTTTATTCGGGAGGTTCTTTCAGGCTGCCTCAAACATCTTCAAGTCACTAA 1713 0.4186 MLIVKEGSRPPWVSLGAAIWVQIASGNTFTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLLPGLACNKFPPWFLLLIGSLASFIGYGILWLSISRTLQSLPYLLLWFALVIASNSSAWLTTAVLVTNMRNFPVSRGTVAGILKGYGGLSAAVFTEIYSIVLHNSSSKFLLLLAIGIPVICFSMMFLVRPCTPATGDDSIEKWHFLFIQGSSVVLGLYLLATTIFGNIVTFSGTVSYILVAVMILLLMAPLAVPIKMTLFPRRASNSNSPEQRVGSSDCPTQRKDDNTEPLLASSSAASLGSFYDQDDSSEVAMLLALGEGAVKQKKRRPKRGEDFKFTEAVIKADFWLLFLVFFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLGGGVVSEHFVRTKTIPRTFLLTCTQTIMLIVYLLFAFAIKGTLYPSIAFLGVCYGVQVSVMLPTVSELFGLKHFGVLSNFMSLGNPLGATLFSAMLAGNIYDSEAAKQIGLIDPSLSCLGPSCFKLTFFILSGVCAVGIFFSIILTLRIKPVYQMLYSGGSFRLPQTSSSH 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1387 570 Gene3D MFS general substrate transporter like domains 344 553 IPR036259 -
Lal17g1387 570 MobiDBLite consensus disorder prediction 267 291 - -
Lal17g1387 570 CDD MFS_Mch1p_like 10 538 - -
Lal17g1387 570 Pfam Nodulin-like 11 258 IPR010658 -
Lal17g1387 570 SUPERFAMILY MFS general substrate transporter 9 196 IPR036259 -
Lal17g1387 570 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 570 - -
Lal17g1387 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 570 - -
Lal17g1387 570 SUPERFAMILY MFS general substrate transporter 215 550 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1387 Lal-Chr17 15304904 15310564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1387 5 570 Nodulin-like Gene Family AT1G80530 55.379 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1387 - - gmx:100794012 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1387 17 15304904 15310564 Lal17g1387 17 15304904 15310564 ECH
Lal14g1800 14 17750902 17753927 Lal17g1387 17 15304904 15310564 PCT
Lal7g1213 7 17800661 17803311 Lal17g1387 17 15304904 15310564 PCT
Lal17g1387 17 15304904 15310564 Lal14g1800 14 17750902 17753927 PCT
Lal17g1387 17 15304904 15310564 Lal7g1213 7 17800661 17803311 PCT