Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1381 ATGTGTGTGCAAGAGGCAGAGCAAATTGCTGAAGAAATTGAGAACCTTGATAACAGAAGAATGTCACCATGGCCTTTGCATTGTGAGCTTTTACATACCCAGATTGAGAACTTGGATAGAACATCTTCTTTGACAACTTCAAGTGTTGAAAAATCATGTCCTCTTGAAAGCATAAGTGAGGAGACAATGATCGTGGACAAGAAACAGATCCGCGTGAGCTTCGTCCCTGCTCTTCGGTCAGGAGAGTGGTCGGATATCGGAGAACGCCCTTACATGGAGGATACTCACATATGCATTGGAGATTTGGCAAACAAGTTTAACAATAACATGCACTCTGAGGAACCTGTTTCCTTTTATGGTGTATTTAATGGACATGGACGGAAAAGTGCAGCTCAATTTGTCCGTGATCATCTGCCAACAGTGATTGTCGAGGATGTGAACTTTCCTCTGGAGCTTGAAAAGGTGGTCACAAGGTCATTTTTGGCGACTGATTTAGCATTCGCGAAAAGATCATCTCTCGAGTCTTCCCTTTCTTCTGGTACAACTGCACTATCTGCAATTATATTTGGAAGGTCCTTACTGGTAGCCAATGCTGGAGACTGCCGGGCTGTCTTGTCCCGTCGTGGAAGGGCTATAGAAATGTCCAAAGATCATAGGCCAACTTGCAGCAAAGAAAGGATGCGGATCGAGTCCCTTGGTGGATTTGTCGATGATGGTTACCTGAATGGCCAGTTAGGTGTTAGTCGCGCTATAGGTGACTGGCACCTTGAAGGAATGAAGGAAACGAGTGAAAGAGGTGGACCACTGAGCGCTGAACCTGAACTTAAATTAACTACATTGACCAAAGATGATGAATTCTTGATAATTGGTAGTGATGGAATCTGGGATGTTTTCAGTAGCGAAAATGCTGTAGATTTTGCAAGAAGGAGGCCTCAAGAGCATAATAATGAGAAACTATGCTGCAAGGAAATAGTACATGAAGCAAAGAAGAGAGGATCAATAGATAACTTAACTGTTTTGATGGTATGTTTTAGCTCAGATCCACCACCACCTGTGATTGTCACAAGAGTCGGAAGAAGCATATCTGCTGAGGGACTTCAGAATCTTAGATTCTTGCTTGAAGAATAG 1128 0.4326 MCVQEAEQIAEEIENLDNRRMSPWPLHCELLHTQIENLDRTSSLTTSSVEKSCPLESISEETMIVDKKQIRVSFVPALRSGEWSDIGERPYMEDTHICIGDLANKFNNNMHSEEPVSFYGVFNGHGRKSAAQFVRDHLPTVIVEDVNFPLELEKVVTRSFLATDLAFAKRSSLESSLSSGTTALSAIIFGRSLLVANAGDCRAVLSRRGRAIEMSKDHRPTCSKERMRIESLGGFVDDGYLNGQLGVSRAIGDWHLEGMKETSERGGPLSAEPELKLTTLTKDDEFLIIGSDGIWDVFSSENAVDFARRRPQEHNNEKLCCKEIVHEAKKRGSIDNLTVLMVCFSSDPPPPVIVTRVGRSISAEGLQNLRFLLEE 375
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1381 375 Gene3D - 62 347 IPR036457 -
Lal17g1381 375 PANTHER PROTEIN PHOSPHATASE 2C 1 362 IPR015655 GO:0004722|GO:0006470
Lal17g1381 375 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 362 - -
Lal17g1381 375 Pfam Protein phosphatase 2C 91 336 IPR001932 -
Lal17g1381 375 SUPERFAMILY PP2C-like 71 345 IPR036457 -
Lal17g1381 375 ProSiteProfiles PPM-type phosphatase domain profile. 79 344 IPR001932 -
Lal17g1381 375 SMART PP2C_4 69 342 IPR001932 -
Lal17g1381 375 CDD PP2Cc 79 344 IPR001932 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal17g1381 Lal-Chr17 15220320 15225802 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1381 74 374 PP2C-type Phosphatase Gene Family AT2G25620 59.344 8.86e-127 368
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Lal17g1381 PP2C 1.2e-67 CL0238
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1381 K14803 - gmx:100813157 531.561