Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1365 ATGGTTGTGGATAATCAAAGGGGTCATGTAGTGGATGAAGAAGGGGTCAATGACCCTTTCCCTGTAGGTATGCGTGTCCTTGCTGTGGATGATGACCCAATTTGTCTCAAAGTTTTGGAAACACTTCTACGCAAATGCCAGTATCATGTTACGACAACTAATCAGGCAATTGAGGCATTGGGAATGTTGAGGGAAAACAGAAATAACTTTGACCTTGTCATTAGTGATGTGAATATGCCAGACATTGATGGATTTAAGCTCCTTGAGTTGGTGGGGCTTGAAATGGACTTACCTGTCATAATGTTGTCAGCACACAGTGATACAAAGCTGGTAATGAAGGGTGTTGCACATGGTGCATGTGACTATTTGCTGAAACCGGTTCGAATCGAGGAGCTGAAGAACATATGGCAACATGTTGTGCGAAGAAAAAAAATCGATGGCGGGGATAAGCCTTCCAAAGAGGAGAAGGTTCCTAATATTGCTGGGGAAGGTAGTCAAGGCATCTTATCAGAAAGCAGTGCAGATCAGAATAAAGCTCTCGGTAAGAGAAGAAAGGACCAAAGTGAGGATGAAGAAGAAGATCTTGAAGCGGATGAAGAAGAGATTGAGGATCCCTCAGCGCAGAAAAGGCCTCGAGTGGTTTGGTCAGTTGAGCTGCATAGAAAATTTGTTGCCGCAGTTAATCAACTCGGCCTTGAAAAGGCTGTTCCAAAGAAAATACTTGACATGATGAATGTTGAAGGGCTTACAAGGGAAAACGTGGCAAGCCATCTGCAGAAATATAGACTCTATCTGAAAAAAGCAACCCAGCAAGCTAGTATGGTTGCTGTATTTGGTGGTAGTGATTCTTACATGCGGATGGGTTCAATAGATGGATACGGAGATTTTTGCACCTCGTCTGGATCAGGAAGGTTGTCAACCACTACATTACCATCTTATGCATCAAGTGGAATTTTCGGTAGGCTGAATTCCCCGGCTGGCTTGAACATGAGAGGAATTAGTTCTTCTGCACTAATCAGTCCTGTCCAATCTCAAAACATTAACAACTCATTAAACACGATTGGAAATATTCCGCCATCATTATTTCCTGCAAATCATAGCTCAAGTTTATTTCACGGCATTCCAACATCAATCGAGCTTACACCGGCCAAACAAAGCAACTGTACAACTGGTTTAACACAGTTAAGTCAAGTTGATCAAAGTGGATTCGCAGTCGCTTCCGGCTTCCCAGACGGTCGGGTTACTGTTGGTAGTGCTAACAATTCTATACCTTGTGTCTCAAATAATCATTTGATGTTACAAGGAAACTCGCAACAAGCCCATTCGGGAGCATTTAGGAATTCGTCTTCTGTTAGAGCAGCTCCTCTGGGAACAGAATCTTTTGATGTCGGCATGTGTAGTTCTTCGAATATGCTGGACTATAATCGTTGTAATGAAAACTGGCAGAGTGCAGCTCAGTTGCCTAAATTTCCTGCCAATTCTTTGCCATTCTGTGAGACTTTCAATAATGACCAACTGCCTTCCACCGGCATAAACGTTTCCAACTCGAATACTCTTACCGGTAACAGTCCAGTGGATTTCTCGTCCAGAATTGCAATTTCTATACCTTTGGAGGATTCTAGAAGTGCGCTGCAATGTCAAGAAGACTTGACTGGGAATATTTTACAGCCTTCAAGTTATACACCACGACAAAGATGGGATGAACATAGACTGGACTATAACGAAAACATGAGCCGTCCCTTCAATTCTGTAAATTCACTGGTTTCTTCTAGTGGAGTGATGAACACTTTGGGGCACAGTTTTAACCAAAATAATACAATTTGCAGCAATAGAATCGATGCATCTTTGTTTGGCCAACTGAATGGGTCTTCCCCATCAATGCCCCAGTGCAACGAGGTTGAGAAACTTTCTTCGGGCATAAGATTCAAGTCAAATGATACCTACATTTTGGAGCAAATGAAGTCCCAGGATGGATTGATTCATAATAATTACGGGACCTTGGATGAGATCATGGGTGCAATGGTCAAAAGGGAGGAGCAACATGATTTGATATTGATGAATGGAGAAATGGGATTTGATACCTATCCTGTGGGATCATGTATCTGA 2106 0.425 MVVDNQRGHVVDEEGVNDPFPVGMRVLAVDDDPICLKVLETLLRKCQYHVTTTNQAIEALGMLRENRNNFDLVISDVNMPDIDGFKLLELVGLEMDLPVIMLSAHSDTKLVMKGVAHGACDYLLKPVRIEELKNIWQHVVRRKKIDGGDKPSKEEKVPNIAGEGSQGILSESSADQNKALGKRRKDQSEDEEEDLEADEEEIEDPSAQKRPRVVWSVELHRKFVAAVNQLGLEKAVPKKILDMMNVEGLTRENVASHLQKYRLYLKKATQQASMVAVFGGSDSYMRMGSIDGYGDFCTSSGSGRLSTTTLPSYASSGIFGRLNSPAGLNMRGISSSALISPVQSQNINNSLNTIGNIPPSLFPANHSSSLFHGIPTSIELTPAKQSNCTTGLTQLSQVDQSGFAVASGFPDGRVTVGSANNSIPCVSNNHLMLQGNSQQAHSGAFRNSSSVRAAPLGTESFDVGMCSSSNMLDYNRCNENWQSAAQLPKFPANSLPFCETFNNDQLPSTGINVSNSNTLTGNSPVDFSSRIAISIPLEDSRSALQCQEDLTGNILQPSSYTPRQRWDEHRLDYNENMSRPFNSVNSLVSSSGVMNTLGHSFNQNNTICSNRIDASLFGQLNGSSPSMPQCNEVEKLSSGIRFKSNDTYILEQMKSQDGLIHNNYGTLDEIMGAMVKREEQHDLILMNGEMGFDTYPVGSCI 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1365 701 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 266 IPR017930 -
Lal17g1365 701 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 681 - -
Lal17g1365 701 SUPERFAMILY Homeodomain-like 208 267 IPR009057 -
Lal17g1365 701 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 263 IPR006447 GO:0003677
Lal17g1365 701 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 681 IPR045279 GO:0009736
Lal17g1365 701 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Lal17g1365 701 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Lal17g1365 701 SMART REC_2 24 136 IPR001789 GO:0000160
Lal17g1365 701 MobiDBLite consensus disorder prediction 146 209 - -
Lal17g1365 701 CDD REC_typeB_ARR-like 26 140 - -
Lal17g1365 701 Gene3D - 23 156 - -
Lal17g1365 701 Gene3D - 206 268 - -
Lal17g1365 701 SUPERFAMILY CheY-like 23 144 IPR011006 -
Lal17g1365 701 Pfam Myb-like DNA-binding domain 212 262 IPR001005 -
Lal17g1365 701 PIRSF RR_ARR_type-B 3 701 IPR017053 GO:0003677|GO:0003700|GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1365 Lal-Chr17 14986892 14991811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1365 18 531 Response Regulator Gene Family AT2G25180 45.000 2.45e-123 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Lal17g1365 Response_reg 2.3e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1365 K14491 - gmx:100776075 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1365 17 14986892 14991811 Lal17g1365 17 14986892 14991811 ECH