Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1364 ATGGAAAGTTCCAAGAACAATAGAGTAGAGAAGAGAGGGTATGGCCTAGTTGAGAAAGGTGATGATGATGAAGATTCACAACATCATGTGACTCAGTCAAAGAAACCTAAGTTACCAGGATTAGCAAGTGTAATTGTGGAAGCTTTAAAGGTGGATAGTCTACAGAGACTGTGTTCATCTTTGGAACCTCTTCTCAGGAAAATTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAATTGGGTCCTGCTCAACTGGCTGAAAGATCACCACCAAGAATAGAAGGACCTGCTGCAAAGAATCTGCAGCTTCATTTCAGAACAAGAATGCCACCGCACTTGTTCACAGGAGGGAAGGTTGAGGGAGAGCAAGGAGCAGCTATCCATGTTGTCCTGCTGGATCCGAACACGGGCAATGTAGTTCAGGTAGGACCAGAATCGGTTGCTAGATTGAATGTTGTAGTGCTTGAAGGTGACTTTAATGAAGAAGCTGATGATGATTGGACAAAAGAGCACTTTGAAAGCCATGAAGTTAAGGAACGTGAGGGGAAAAGGCCACTTCTAACCGGAGATTTGCAGGTTAACCTAAAGGAAGGGGTAGGGACCCTAAGTGATCTTACTTTCACCGACAATTCTAGCTGGATAAGAAGCAGAAAATTCAGGCTTGGTGTTAAGGTGGCTCCTGGGTCTTGTGAGGGGATTCGTGTTCGCGAGGGAAAAACTGAAGCTTTTGCAGTTAAAGATCATAGAGGAGAATTATACAAGAAACACTATCCACCAGCATTACATGACGAAGTTTGGAGACTGGATCGAATTGCGAAGGATGGGGCACTTCACAAAAAATTGATTCAAGCAAAAATATCAACTGTCGAAGATTTCCTGCGCCTTCTTGTCCGTGACCCACAGAAATTAAGAAGTATACTTGGTAGTGGAATGTCCAACAGAATGTGGGAGAATACAGTGGAGCATGCCAAGACATGTGTCTTGGGTGGTAAGCTCTTCGTTTACTACACCGATGAAACCGGTAGCACTGGCATTGTGTTCAACAATATATACGAGCTGAGAGGCCTCATTGCAGACGGGCAATTTTTCTCGTTGGATTCCCTTACTCTAGATCAGAAGATGTCTGTGGATTCCTTGGTGAAGAAGGCATACGACAACTGGAACCAGGTTATAGAATATGATGGCAAAGTTTTTAACTCCAAAAAGGGTTCAAGATCTTTAGTAACACCTATGTTGCTTCATAACAATGTCCAAGAGCAGCACTATACTTATCCAAAGAATAGGGTACCATATGTCCCCTCTGAACCAAATCAATATTTGCAAATAACAAATAACTACTCATCTGGTCCTGAGTTGACTGATTATCCGTTCGGAAGATCGGATAATCAGATGGTAGGGACATCATCAAATAACTCGCAAATAGCATTGTCAGGGAGCATGAATTACATACCCGATGAACATCAGGAAGTTGAAGGTACATATTTTCAAGGAGACTGGTCTAAGCAGAGAAGTGGGCAAGGATTGGAAGATATTGTAGCCGAAGAACTTCGTCTTAGGAGTTCGGAGATGTTGGGGAGTGACGATATGCAAAGGTTACTTAAGACAATTAACTATGGTCATTCTAATGAGGCTTGTTATACCTATAGTCTTCAATATGAACCTCAGATGTATGATTCATTCAGTGAGGATCATGGTAAGTCTTCAGGAAAAGCTGTTGTTGGATGGCTTAAGCTAAAAGCTGCTTTGAGATGGGGTATATTTATAAGGAAAAAAGCTGCAGAAAGGAGAGCACAGCTTACTGAGTTGAATTGA 1812 0.4233 MESSKNNRVEKRGYGLVEKGDDDEDSQHHVTQSKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALAKLGPAQLAERSPPRIEGPAAKNLQLHFRTRMPPHLFTGGKVEGEQGAAIHVVLLDPNTGNVVQVGPESVARLNVVVLEGDFNEEADDDWTKEHFESHEVKEREGKRPLLTGDLQVNLKEGVGTLSDLTFTDNSSWIRSRKFRLGVKVAPGSCEGIRVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQAKISTVEDFLRLLVRDPQKLRSILGSGMSNRMWENTVEHAKTCVLGGKLFVYYTDETGSTGIVFNNIYELRGLIADGQFFSLDSLTLDQKMSVDSLVKKAYDNWNQVIEYDGKVFNSKKGSRSLVTPMLLHNNVQEQHYTYPKNRVPYVPSEPNQYLQITNNYSSGPELTDYPFGRSDNQMVGTSSNNSQIALSGSMNYIPDEHQEVEGTYFQGDWSKQRSGQGLEDIVAEELRLRSSEMLGSDDMQRLLKTINYGHSNEACYTYSLQYEPQMYDSFSEDHGKSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLTELN 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1364 603 Pfam Calmodulin binding protein central domain 260 326 IPR046830 -
Lal17g1364 603 Pfam Calmodulin binding protein-like N-terminal domain 101 248 IPR046831 -
Lal17g1364 603 MobiDBLite consensus disorder prediction 1 37 - -
Lal17g1364 603 PANTHER OS02G0177800 PROTEIN 10 407 IPR012416 GO:0005516
Lal17g1364 603 PANTHER OS02G0177800 PROTEIN 499 602 IPR012416 GO:0005516
Lal17g1364 603 MobiDBLite consensus disorder prediction 1 32 - -
Lal17g1364 603 PANTHER OS02G0562300 PROTEIN 499 602 - -
Lal17g1364 603 PANTHER OS02G0562300 PROTEIN 10 407 - -
Lal17g1364 603 Pfam Calmodulin binding protein C-terminal domain 331 393 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1364 Lal-Chr17 14980144 14985495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1364 1 603 Calmodulin-binding Proteins AT2G24300 61.280 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1364 - - lang:109328235 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1364 17 14980144 14985495 Lal17g1364 17 14980144 14985495 ECH