Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1358 ATGCAACCCATTAGCAGAGAAATGCAAGGAATCAATTCCCTTATAAACTCTTCACAAATTTCACTTCAAGACCTTAACAACCAGATCCAAAACCCTCACATGAACATTAACCATAACCAACAACTTAACCCTTTTGACCCCACTTCCCATGACGATTTCCTCCAACAAATGCTCTCTAACCTTGATTCTTCTTCTTCTTGGCTAGACCACGACACCAACATTAACAACAAACCCATGTTGTGGGAACACAAGCATGATGAAACAACGTTGTCTAACATGGAAAATAATGTTGTTGGTTTTCCTTATGATAATGAACACGTTGGCTTGGCTTCCAAGTTCCGTAACCACCAGATTAATGCTACATCTCCGACGAACAAGGCGGCTGCGGCGGCGGCTCTTTTGCTCCACCACCAGCTTCTCATGGCTAGAGGCGTCGCCGCCGATTCTGGGCTACCCCAGATGCCGGTTTCTTTGGGTGGAAACGACGTCGTTGATGGGTCATCTTTCAAATCTCCTAATCTGAGTGCTGAGAATTCTCTTCAAGCTATGCATAACGGTTTCGCTGGATCTTTGCATGGAACCGTTCAAGCTTCAAACCAGACTCAACATTTTCAACCTCCTCAGGGTGCAACGATTAACCAAGCTGCTCCAACGAATGGTGCGGTAGGTGGAACACAGGGTCAGCCTAGGCAGAGGGTTCGAGCCAGAAGAGGTCAAGCCACGGACCCACACAGCATTGCTGAAAGATTACGAAGGGAGAGAATAGCAGAGAGAATGAAGGCCCTTCAGGAATTGGTTCCTAATGCCAACAAGACAGACAAAGCATCCATGCTGGATGAGATCATCGATTACGTGAAGTTCCTACAGCTTCAAGTCAAGGTTCTGAGCATGAGCAGATTGGGCGGTGCAGGTTCTTTCACACCCTGTGTTTCTGATATGCCCTCTAAGGGAGGCGGTGACTGCATACAGACAAACGGCAGTGGGGCCCTCCAACGGTATACTAACGGCAACCAAACGGCAGCGTCAACCTCTAACAACGAAAGCCTCACCATGTCGGAGCACCAAGTGGCCAAGCTCATGGAGGAGGACATGGGCTCCGCCATGCAGTACCTCCAAGGCAAGGGCCTCTGCCTCATGCCCATATCTCTCGCCACCGCCATCTCCACGTGTCACACCAGGAACAACAACCACTTGACTAACGGCGTTCATAACGGCAGTGCTGGCGTCAACTTAAACCTAACTAACGGCGAAGGGCCGTCATCTTCGAGCGTGTCCGTTACAACAGTACAGTCAGCTGCCGTCGCTAACGTTAACGCCGTAAGAGACGCTGCCTCTGTTTCGAAGCCGTGA 1350 0.497 MQPISREMQGINSLINSSQISLQDLNNQIQNPHMNINHNQQLNPFDPTSHDDFLQQMLSNLDSSSSWLDHDTNINNKPMLWEHKHDETTLSNMENNVVGFPYDNEHVGLASKFRNHQINATSPTNKAAAAAALLLHHQLLMARGVAADSGLPQMPVSLGGNDVVDGSSFKSPNLSAENSLQAMHNGFAGSLHGTVQASNQTQHFQPPQGATINQAAPTNGAVGGTQGQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAGSFTPCVSDMPSKGGGDCIQTNGSGALQRYTNGNQTAASTSNNESLTMSEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTCHTRNNNHLTNGVHNGSAGVNLNLTNGEGPSSSSVSVTTVQSAAVANVNAVRDAASVSKP 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1358 449 SMART finulus 245 294 IPR011598 GO:0046983
Lal17g1358 449 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 239 288 IPR011598 GO:0046983
Lal17g1358 449 MobiDBLite consensus disorder prediction 201 244 - -
Lal17g1358 449 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 237 298 IPR036638 GO:0046983
Lal17g1358 449 Pfam Helix-loop-helix DNA-binding domain 244 289 IPR011598 GO:0046983
Lal17g1358 449 PANTHER TRANSCRIPTION FACTOR BHLH69 41 400 - -
Lal17g1358 449 Gene3D - 234 296 IPR036638 GO:0046983
Lal17g1358 449 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 41 400 - -
Lal17g1358 449 MobiDBLite consensus disorder prediction 201 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1358 Lal-Chr17 14892201 14897893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1358 221 394 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 74.302 9.22e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal17g1358 HLH 1.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1358 - - gmx:100807286 457.603