Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1348 ATGGGTTTTGGGATATTTGGTTCAATTCTAGTTCTGACACTTTTCTTCAAGCACTTATCATCTCAGCAACCGAATACTGATGACTTTCTTGTATCTGAGTTCTTGAAGAAAATGAGTTTCACTTTAACATCTTCCAAGGCCTATTACAACTTCTCTGCTTCTATTTGTTCATGGGAAAGAGTTTCTTGTGATGCCAATAGAGAACATGTTGTCGAGTTAGTATTTTCGGGTATCGGTCTATTAGGCCCTATTCCTGATACAACTATAGGCAAGCTTAGCAAGCTTGAATCTTTGGATCTTAGCAACAACAAAATCACTGATTTGCCTTCGGATTTCTGGAGTTTAAGCTGTCTCAAGAAGCTTAACCTTTCATCCAATAACATTTCTGGCTTATTGACTAATAACATCGGAAACTTCGGTTTGCTAGAAATATTTGACTTATCCAGCAACAATTTCTCTGGGGTAATTCCTGAAACTATTGGCTCCTTTGAGAGTCTAGAGGTCCTTAAACTTGACCACAACAGGTTTCAGCAAAGCATACCGTATGCGATTCTTAAGTGCCATTCTCTAGTTTCAATTGATCTTTCATCAAATCAGCTTAGTGGGACAATTCCACATGGTTTCGGTGCTGCTTTTCCTAAGCTCAGGACCTTAAACCTTGCTCAGAATAATATTTATGGTGATGATTCAGATATTTCCGGGTTAAATTCCATTGTGAGTCTCAACTTATCTGGAAATTCGTTTCAGGGCTCGGCAATAGGTGTGTTTCGGGGAAGTCTGGAGTTTATGGACCTTAGCAGAAACCAATTTCGAGGTCGCCTTTCGCAGGTACACCTCAATTCTAATTACAATTGGTCTCAATTAGTCTATCTCGATTTGTCAGAGAATCAGCTTAATGGTGAAATTTTCCAAAACATGAATGAATTCCATAATCTAAACCACCTTAATCTTGCTCACAATAGATTTACTAGACAGAAATTTACCAACTTTGCAATGCTCTCGGGATTGGAATATCTTAACTTGTCCAAAACTAGCCTTGTTGGTTATATTCCGGATGAAATCTCGAACCTGAGTAATTTGAATGCACTTGATATTTCTATGAATCACCTTATAGGAAGAATTCCTTTACTGAGCACTAAGAACCTTCAAGTTCTTGACCTTTCAAACAACAATTTCAGTGGAGAAGTCCCTCCATTAATATTGGAGAAACTCCCACAGATGAAGACATACAATTTCTCTTACAATAACTTAACCATCTGCGCTTCGGAAATCAAACCTTATATCCTCGAAACAGCATTCTTTGGATCGGTGAACAGTTGCCCAATTGCGGCAAACCCAAGTCTTTTGAAAAAAAGAGACACTCAACATAAGGGAATGAAGCTAGCTCTAGCATTGACCCTCTCAATTATCTGTTTGCTTACCGGACTTTTGGTAGCACTTGGTTGCCTTACGAAAAACAAATCACGGCCAGTTAAGCAAAGTTCACACAAAGAAGAACCAAATGTATCAGGTCCCTTCTCATTCAAGACTGATTCAACAACTTGGGTGGCAGACGTTAAGCAAATGACATCAGTCCCAGTAGTAATCTTTGAGAAGCCACTGTTGAGTATTACTTTTGCAGACCTCTTGGCTGCAACTTCAAATTTCGATAGGGATGAAGAAGCTGCAAGAGAGTTTGAGTATCTTGGTAGAATCAAGCACCCGAATTTTGTTCCTCTAACTGGCTATTGTGTAACGAGGGATAGGAGGATTGCCATATATGATTATATGGAGAACGGGAACTTGCAAAATTTGCTTTATGACTTGCCACTCGGGGTACTACAAAGGACAGATGATTGGAGCACAGACACATGGGAAGAAGATAATGACATTCAAAACGCTGGGACTGAAGGATTCTTTACAACTTGGAGTTTTCGCCACAAAATCGCTCTTGGCGCTGCCCGAGCATTGGCATTTCTGCATCACGGATGCTCACCACCGATCATTCACAGAGATGTTAAAGCTAGCAGTGTTTATTTGGACTATAACTTGGAGCCAAGACTTTCTGATTTTGGGCTGGCTAAGATTTTTGGGAGTGACTTGGATGAGGATATTGCACTTGCTACTCCTGGTTATGTTCCACCAGAGTTTTCTAAACCATAA 2142 0.3987 MGFGIFGSILVLTLFFKHLSSQQPNTDDFLVSEFLKKMSFTLTSSKAYYNFSASICSWERVSCDANREHVVELVFSGIGLLGPIPDTTIGKLSKLESLDLSNNKITDLPSDFWSLSCLKKLNLSSNNISGLLTNNIGNFGLLEIFDLSSNNFSGVIPETIGSFESLEVLKLDHNRFQQSIPYAILKCHSLVSIDLSSNQLSGTIPHGFGAAFPKLRTLNLAQNNIYGDDSDISGLNSIVSLNLSGNSFQGSAIGVFRGSLEFMDLSRNQFRGRLSQVHLNSNYNWSQLVYLDLSENQLNGEIFQNMNEFHNLNHLNLAHNRFTRQKFTNFAMLSGLEYLNLSKTSLVGYIPDEISNLSNLNALDISMNHLIGRIPLLSTKNLQVLDLSNNNFSGEVPPLILEKLPQMKTYNFSYNNLTICASEIKPYILETAFFGSVNSCPIAANPSLLKKRDTQHKGMKLALALTLSIICLLTGLLVALGCLTKNKSRPVKQSSHKEEPNVSGPFSFKTDSTTWVADVKQMTSVPVVIFEKPLLSITFADLLAATSNFDRDEEAAREFEYLGRIKHPNFVPLTGYCVTRDRRIAIYDYMENGNLQNLLYDLPLGVLQRTDDWSTDTWEEDNDIQNAGTEGFFTTWSFRHKIALGAARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGSDLDEDIALATPGYVPPEFSKP 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1348 713 SMART LRR_typ_2 115 139 IPR003591 -
Lal17g1348 713 SMART LRR_typ_2 379 403 IPR003591 -
Lal17g1348 713 SMART LRR_typ_2 163 187 IPR003591 -
Lal17g1348 713 SMART LRR_typ_2 92 114 IPR003591 -
Lal17g1348 713 SMART LRR_typ_2 235 258 IPR003591 -
Lal17g1348 713 SMART LRR_typ_2 333 357 IPR003591 -
Lal17g1348 713 SUPERFAMILY L domain-like 45 422 - -
Lal17g1348 713 Pfam Leucine Rich Repeat 381 399 IPR001611 GO:0005515
Lal17g1348 713 Pfam Protein kinase domain 551 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1348 713 SMART tyrkin_6 470 711 IPR020635 GO:0004713|GO:0006468
Lal17g1348 713 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 552 710 - -
Lal17g1348 713 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 552 - -
Lal17g1348 713 PRINTS Leucine-rich repeat signature 95 108 - -
Lal17g1348 713 PRINTS Leucine-rich repeat signature 357 370 - -
Lal17g1348 713 ProSiteProfiles Protein kinase domain profile. 477 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1348 713 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 552 - -
Lal17g1348 713 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 552 710 - -
Lal17g1348 713 ProSiteProfiles Leucine-rich repeat profile. 94 115 IPR001611 GO:0005515
Lal17g1348 713 SUPERFAMILY Protein kinase-like (PK-like) 550 710 IPR011009 -
Lal17g1348 713 Pfam Leucine rich repeat 142 200 IPR001611 GO:0005515
Lal17g1348 713 Pfam Leucine rich repeat 311 370 IPR001611 GO:0005515
Lal17g1348 713 Pfam Leucine rich repeat 84 128 IPR001611 GO:0005515
Lal17g1348 713 Gene3D Ribonuclease Inhibitor 187 431 IPR032675 -
Lal17g1348 713 Gene3D Ribonuclease Inhibitor 31 185 IPR032675 -
Lal17g1348 713 ProSiteProfiles Leucine-rich repeat profile. 381 403 IPR001611 GO:0005515
Lal17g1348 713 Gene3D Transferase(Phosphotransferase) domain 1 541 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1348 Lal-Chr17 14749844 14752092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1348 65 710 Receptor kinase-like Gene Family AT4G39400 31.481 4.70e-73 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lal17g1348 Pkinase 2.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1348 - - gmx:100807051 1055.82