Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1344 ATGGCGGAACTTGAACACTGCATCAAGGAAAATGAAAAAGAGGAAGAGATTGTGAAGAAACGAGTCAGTGACTCACCGCTTATTACTGAGTCGAATCATGTCGAGTTAGATAGTTTCAGTTCTCATCATGAAGTGGGACCCAATTTAGAAACCCTAGTTGTTGTTGTTGATCATAGTGATGATTTGAAAGGAGGAGTTATAATTCATAACGCTGGCGAAGCAGAGAATAAGCCAGTTGGACCTACTGATATACAAATTATTGTAGAAGAAGTTGAGGCACCTCAAGTATCTACAGGAAATCAACCTCGGGTCGTTGTGTGTTCAAGTCCATTGTCTGAACTATCACCAACTTCTGTTGCGCAATCTTTATCGTCTGCCGCTTGTCCAACTTTACCAGAACAGAGGCTCTTATCTCCTAAGGTCAATAGTGCACGTATGACACAAGTTGAAAAAAAAACTCCTAAAGGTGGCAAAACCTCACCTTCTGTTTCTGCTGCAAGGACATCTGCGCCTGATGGATACAACTGGCGTAAGTATGGCCAGAAGCAAGTGAAGAGTCCTACAGGTTCTAGAAGCTATTACAGGTGCACCCATTCAGATTGTTCTGCAAAGAAGATTGAATTCTGTGACCATTCAGGTCAGGTGATAGAGATTGTTTATAAAAGTCAACATAGCCATGATCCCCCGCAGAAGACTAATTTCAGTAGGGAAAGTAAGTTCATGCCTTCCAGTGAACCTATTCTAGAAAACAGTGTTCCGGTGCAGCCTATCGGAGTTGTAAACGATTCTGGTCCATCCTCTTCTTCAAGAGAACCTAAACAAGAAGTGCCTTGCAGTGCTGGTGCTGATAAGAAACAACAAAACTCATCTAACAGTGAGAATGGTAAAGTTATTTTGAAGGAGGGGGATGCTAATGAGCTTGAGCTGAAAAGAAGGCAAGTTTGTATAGATGATTTAACATGCTTGGAGTCACCAGTAAAACCTGGAAAGAAACCCAAGCTTGTTGTACATGCGGCAGCGGATGTGGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAAAAAATGGTGAAGGGGAATCCACATCCCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCGGTTCGAAAGCATATTGAGACCGCAAGAGATAACTCAAACGCAGCCATCATAACATACAAGGGAGTGCATGACCATGACATGCCTGTGCCCAAGAAACGACACGGCCCTCCATGTGCGCCACTCGTGACTGCTGCAGCACCTGCGTCAATGAACAATTTGAAGTCAACGAAAACTGACTCACTGCAAAATCAGAAAACTGACTCACTGCAAAATCAGAAAACTTCTACCCGATGGTCGGTGGACACAGAAGGAGAATTAACCGGGGAAGCCTTGGACCTTGGTGGTGAGAAAGCAATAGAGTCGGCTCGAACTCTTCTGAGCATAGGCTTTGAAATTAAACCTTGCTGA 1479 0.4402 MAELEHCIKENEKEEEIVKKRVSDSPLITESNHVELDSFSSHHEVGPNLETLVVVVDHSDDLKGGVIIHNAGEAENKPVGPTDIQIIVEEVEAPQVSTGNQPRVVVCSSPLSELSPTSVAQSLSSAACPTLPEQRLLSPKVNSARMTQVEKKTPKGGKTSPSVSAARTSAPDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCSAKKIEFCDHSGQVIEIVYKSQHSHDPPQKTNFSRESKFMPSSEPILENSVPVQPIGVVNDSGPSSSSREPKQEVPCSAGADKKQQNSSNSENGKVILKEGDANELELKRRQVCIDDLTCLESPVKPGKKPKLVVHAAADVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETARDNSNAAIITYKGVHDHDMPVPKKRHGPPCAPLVTAAAPASMNNLKSTKTDSLQNQKTDSLQNQKTSTRWSVDTEGELTGEALDLGGEKAIESARTLLSIGFEIKPC 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1344 492 MobiDBLite consensus disorder prediction 139 169 - -
Lal17g1344 492 ProSiteProfiles WRKY domain profile. 340 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g1344 492 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 67 490 - -
Lal17g1344 492 SMART WRKY_cls 345 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g1344 492 SMART WRKY_cls 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g1344 492 MobiDBLite consensus disorder prediction 221 298 - -
Lal17g1344 492 ProSiteProfiles WRKY domain profile. 165 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g1344 492 SUPERFAMILY WRKY DNA-binding domain 339 405 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal17g1344 492 MobiDBLite consensus disorder prediction 281 296 - -
Lal17g1344 492 Pfam WRKY DNA -binding domain 172 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g1344 492 Pfam WRKY DNA -binding domain 347 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal17g1344 492 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 490 IPR044810 GO:0003700
Lal17g1344 492 MobiDBLite consensus disorder prediction 225 274 - -
Lal17g1344 492 MobiDBLite consensus disorder prediction 432 456 - -
Lal17g1344 492 MobiDBLite consensus disorder prediction 139 176 - -
Lal17g1344 492 Gene3D WRKY domain 158 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal17g1344 492 Gene3D WRKY domain 330 406 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal17g1344 492 SUPERFAMILY WRKY DNA-binding domain 168 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1344 Lal-Chr17 14720342 14725554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1344 109 492 WRKY Transcription Factor Family AT4G30935 52.699 9.69e-119 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal17g1344 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1344 - - gmx:100127377 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1344 17 14720342 14725554 Lal17g1344 17 14720342 14725554 ECH