Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1240 ATGGGGACCTCACAAAACGCTGCTGGCGGCCGCAGCGCCGCCGCACTTGACAAGGACGTTGACTTCGCCCAGTATTTCTGCACCTATTCTTTCCTTTACCACCAGAAGGAGATGCTCTCTGATCGTGTTCGCATGGATGCTTACTTTAATGCTATTTTTGAGAATAAACGTCACTTTATTGGCAAGACTGTTTTGGATGTGGGAACTGGAAGTGGCATTCTTGCTATATGGTCAGCACAAGCAGGTGCAAGGAAGGTATATGCAGTTGAAGCTACTAAGATGTCAGAACATGCCCGTGCGCTTGTTAAAGCAAATAATCTCCAAGATGTAGTTGAAGTCATCGAGGGCTCAATCGAGGATATTTCCTTGCCAGAGAAAGTGGATGTGATCATCTCTGAATGGATGGGTTATTTTCTTCTGCGTGAGTCTATGTTTGATTCAGTCATATGTGCTCGTGACCGCTGGCTCAAACCAACTGGAGTGATGTATCCTAGTCATGCTCGTATGTGGATGGCACCGATTAGAACTGCGATAATAGATCATAAAGTGGGTGATTACCACTCAGCTATGGATGATTGGCATAGCTTTGTTGATGAAACAAAAACCTGCTATGGTACATCATTATGGAACAACCTTCATCCACATCAAGTCATAGGAACTGCTGCTATAATAAAGGACATTGATTGTTTAACTGCTACAGTCGCTGAGATAGAGAAAGTCAGATCAAACTTTTCTTTGTCAATAACCACGGACAACACGAAGTTGTGTGGGTTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAAACGAGGATCCAGCTGAACAAGAGATTGAGTTAAATACAGCTCCCAGTGTAGATTACCCTACACACTGGGGCCAACAGGTTTTCCTCTTGCATCCTCCCACACACGTGGGTGAGGGTGATGACTTGAGTATTTCTTTCCTAATGAGTCGCTCTAAGGAAAACCATCGCCTCATGGAGAATCTTCTTCTTTTTTGGTTACATGGATTTTCTTCATCAGCATTGAGCTTTACATGGATTGTCATCACTCATCAGGTGGAATTGCGCGATCATCACTCCAGGGTTTCATGTGTTGATTCTGATAAAGTTACAAAAGAAAGTGGTTCACACAATATCTGTAACAATTTTGGTTTTTTCAAGAATCTGGTTATGACTTGA 1182 0.4315 MGTSQNAAGGRSAAALDKDVDFAQYFCTYSFLYHQKEMLSDRVRMDAYFNAIFENKRHFIGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQDVVEVIEGSIEDISLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTAIIDHKVGDYHSAMDDWHSFVDETKTCYGTSLWNNLHPHQVIGTAAIIKDIDCLTATVAEIEKVRSNFSLSITTDNTKLCGFGGWFDVHFRGRNEDPAEQEIELNTAPSVDYPTHWGQQVFLLHPPTHVGEGDDLSISFLMSRSKENHRLMENLLLFWLHGFSSSALSFTWIVITHQVELRDHHSRVSCVDSDKVTKESGSHNICNNFGFFKNLVMT 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1240 393 Pfam Ribosomal protein L11 methyltransferase (PrmA) 61 132 - -
Lal17g1240 393 Gene3D - 166 343 - -
Lal17g1240 393 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 331 IPR029063 -
Lal17g1240 393 CDD AdoMet_MTases 63 163 - -
Lal17g1240 393 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 330 IPR025799 GO:0016274|GO:0018216
Lal17g1240 393 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 8 323 IPR025799 GO:0016274|GO:0018216
Lal17g1240 393 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Lal17g1240 393 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 8 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1240 Lal-Chr17 13376691 13382632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1240 24 312 C2H2 Transcription Factor Family AT3G12270 32.166 1.83e-39 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1240 K11434 - gmx:100790625 588.571