Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1179 ATGGACGCGCGACACGTCTCACGCGCCGCCATCGATCCAAGAATCAGGCGCGTTGGTTTCTTCGCCTCTCGTGCAGAACCGGACCCGTCCGAACCCGATTCCATGCCTATTTCGGACTCCTCGGCTTCCAATTTGGTTAATCCGGTCATGACACAACCGCCACGCCATCTTTCTGAGCGAACTGCCGCGGTGCCAGTCCCCGAGACTGGGTTTCGGCGGCAAGTGTCCGGAGACATGCTGCCGATTGGGAGCTACAACCCTTCTGAGTCGCTTTTAGGAACTTCGCCAACGGCGTCCGGTGTTGGAATGGATGACGGGCAGTTCTCGGAGGACTCTTCCGGCTGGTTTCTTCGTAGCGAGTCGAGTTTCGCCGGAGGAAGGTTTGATTTGCCTGCCGTGAAGCTGCCTGAAATTTTGGTGGAGAATAATTTGGCTGTGGCGGTGAATGTGAAAAATCTAGCTGGAGGCACCCATAAAGAGAGCAAAAATCTTGAAGAAAATAGAGAGGATGCTGTAAAAGAAGTACGCTCTGATCTGGTTGCAATTTCAAAGCCATTGAAGGAAAAAGCCACAAAGGCTGAGAGACGAGCTTTGCAGGAGGCACAGAGAGCTGCAAAAGCTGATTCTAAAGTTGGGAGAGCAGCTCCTGGAAAAAGTACAAAACAGTCATCTCAAAAGAAAGATGGTCCTACTGTTACATCTACAGTGGTGACTGACAAGAGATCTGGAAATCGTCCTTCAGAGAAAGAGAGAAAAAAAGATGTTCCTGCAACACGAATGCAGTTTGATGACAAAAACAGAGTGGATAAGGCTAAAAGGCGTGCAGTAGTCAATCAAACTGAAGCTAGAAATAGAGCTGAATTATTTCGGCATTTGCCTCAATATGAATATGGGAGTCAGCTTCCTCAACTTGAGGCAAGGCTTTTCCAACTTGATTCCGTGCATCCTGCTGTGTTCAAGGTTGGATTGCGTTATTTGGCAGGAGATATATCAGGCTGTAATGCTCGTTGCATTGAAATGCTAAGAGCATTTCAAGAAGCCATTGGAGACTACTCCACTCCTCCTGAGAAGGCTCTTGTTAGGGATTTAACTGCAAAAATTAGTAGTTACGTTTCATTTTTCATTGAATGTAGACCTCTTTCTATCAGCATGGGAAATGCAATAAGGTTTGTAAAGAGCCGTATTGCCAAGTTGCCTTTAAGTCTTTCTGAATCTGAGGCAAAAGCAGCTCTTTGTTCTGATATTGACCGATTCATTAATCAAAAAATAATTCTTGCTGATAAAGTGATTGTTGAACATGCTGCTACCAAGATTAGGGATGGAGATGTTCTTCTTACATATGGATCATCATGTGTTGTTGAGATGATTCTTTTATATGCTCATGATCTTGGCAAACAGTTTAGTGTTGTGGTAGTAGACTCACGACCAAAGCTTGAAAGTCAAGCTTTGCTTCGTAGGCTGGTGGCAAATGGCCTGAATTGTACATACACTCATATAAATGCTGTTTCTTATGTCATGCATGAGGTCACTCGAGTATTTCTTGGAGCTTCTTCTGTCCTGTCTAATGGAACTGTATATTCAACGGTCGGGACTTCATGTGTCGCAATGGTAGCTCATGCATTTCATGTGCCTGTATTGATCTGCTGCGAAGCATATAAGTTTCATGAAAGGGTGCAACTTGATGCAGTATGTTCCAATGAACTAGGGCACCTTTCTCCCACTTCTATTTACTTGCGTCTCAAGCAAGGTGATCCAGATGCTGTTGCCACGGTTCCTGGAAGAATGGACATCAATTATCTGAGCAATTGGACTAATGAAGAAAATTTACAGCTTCTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCTCGGTGATTGTTACTGATTATGGAATGGTCCCTCCTACAAGTGTGCCTGTAATTGTCCGTGAGTATGGACGACAACACTTGATATAG 1959 0.4461 MDARHVSRAAIDPRIRRVGFFASRAEPDPSEPDSMPISDSSASNLVNPVMTQPPRHLSERTAAVPVPETGFRRQVSGDMLPIGSYNPSESLLGTSPTASGVGMDDGQFSEDSSGWFLRSESSFAGGRFDLPAVKLPEILVENNLAVAVNVKNLAGGTHKESKNLEENREDAVKEVRSDLVAISKPLKEKATKAERRALQEAQRAAKADSKVGRAAPGKSTKQSSQKKDGPTVTSTVVTDKRSGNRPSEKERKKDVPATRMQFDDKNRVDKAKRRAVVNQTEARNRAELFRHLPQYEYGSQLPQLEARLFQLDSVHPAVFKVGLRYLAGDISGCNARCIEMLRAFQEAIGDYSTPPEKALVRDLTAKISSYVSFFIECRPLSISMGNAIRFVKSRIAKLPLSLSESEAKAALCSDIDRFINQKIILADKVIVEHAATKIRDGDVLLTYGSSCVVEMILLYAHDLGKQFSVVVVDSRPKLESQALLRRLVANGLNCTYTHINAVSYVMHEVTRVFLGASSVLSNGTVYSTVGTSCVAMVAHAFHVPVLICCEAYKFHERVQLDAVCSNELGHLSPTSIYLRLKQGDPDAVATVPGRMDINYLSNWTNEENLQLLNLMYDATPSDYVSVIVTDYGMVPPTSVPVIVREYGRQHLI 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1179 652 MobiDBLite consensus disorder prediction 242 271 - -
Lal17g1179 652 Pfam Initiation factor 2 subunit family 330 636 IPR000649 GO:0044237
Lal17g1179 652 MobiDBLite consensus disorder prediction 22 43 - -
Lal17g1179 652 MobiDBLite consensus disorder prediction 216 241 - -
Lal17g1179 652 Gene3D - 426 646 IPR042529 -
Lal17g1179 652 MobiDBLite consensus disorder prediction 186 207 - -
Lal17g1179 652 MobiDBLite consensus disorder prediction 186 271 - -
Lal17g1179 652 SUPERFAMILY NagB/RpiA/CoA transferase-like 327 646 IPR037171 -
Lal17g1179 652 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 651 - -
Lal17g1179 652 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1179 Lal-Chr17 12169233 12177113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1179 1 652 Eukaryotic Initiation Factors Gene Family AT5G38640 56.642 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1179 K03680 - gmx:100778711 886.715