Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1149 ATGAATGCAGCCAATGACTCAAACAGTACACAATACATGAAACTGAAGAACAAGCTGATTAAGCAGACGAGTGAGATCAGCACTCTCGATGGAACTGATGCATGTGTCATCATTTATGGCCCAAATCAACCTCGACCAGAGATTTGGTCGTCTCGCCTAGGTGTTCAAGGTATGATCAACAAGTTCAAGGCAATGCCCAAGTTGGAACGAACCAGGAATATGTTTAACCGTGAAAGCTTCTTGAAGAAAATGCTCACCAAGACCCTACAGAAGCTGGAGAATCTGAAAAAGGAGAACATGAAAAGGCAAATCGAGCTTTTAATGTTCCAGTGTATGAATTCTGGTAGCATTGTTAACAACAATGCTAGCAATGTTGATATGAATGACCTCGTGTGGGCAATAAACCAGAACCTGAAAGATGTTGATGGGGAAAATGGTGTGGATGAAACCGAACATGGCACAATAATGGCTCTAAATGGAGCAGAAGCTTTGAATGGAGAAGGTGCAAATGTTGGTGTTGCTGGCAAAGGAATGATTGAGGCCAATATGGGTGCCGTGGAGAATGAGGATTTGGCTTCTGACTTTGGCAATGATGGAGGGGATGCAGCGCTTGCATTCGGAGATGATTATCTCTCAAATGAGTCTGAGAATGGTTCTTCAACCCCATGA 669 0.4335 MNAANDSNSTQYMKLKNKLIKQTSEISTLDGTDACVIIYGPNQPRPEIWSSRLGVQGMINKFKAMPKLERTRNMFNRESFLKKMLTKTLQKLENLKKENMKRQIELLMFQCMNSGSIVNNNASNVDMNDLVWAINQNLKDVDGENGVDETEHGTIMALNGAEALNGEGANVGVAGKGMIEANMGAVENEDLASDFGNDGGDAALAFGDDYLSNESENGSSTP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1149 222 Gene3D - 5 107 IPR036879 GO:0003677|GO:0046983
Lal17g1149 222 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 8 142 - -
Lal17g1149 222 PANTHER SERUM RESPONSE FACTOR HOMOLOG 8 142 - -
Lal17g1149 222 SUPERFAMILY SRF-like 7 85 IPR036879 GO:0003677|GO:0046983
Lal17g1149 222 Coils Coil 78 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1149 Lal-Chr17 11741643 11742311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1149 7 144 Type I MADS-box Gene Family AT5G27960 37.681 2.45e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Lal17g1149 SRF-TF 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1149 - - lang:109329207 217.238