Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1142 ATGCCGGATATACCTAAACGTGGCGTGGAGAATGTGAAAGCGGAAGGATTTCCCTCCTCTTCGTGTAACAAGAAGCTCATTGGTGCTAGAAGCTTCTATAAAGGGTTCGAGATGGCAATGAGAAATAGGAATGGTAAAGGGAGTGAGATAATAATTAATTCCCTAGAGATACGGATGGTCACGGGACCCATACTGCGAGCACTGCTGCTGGGTCCCATCGGCATTGCTCGTGGTATGGCCCCACAAGCACGTGTAGCAGCCTATAAGGTTTGCTGGGAGGAAGATTGTTTTTCATCTGACATCCTTGCTGGCATGGAACGTGCCATAGAGGATGGTGTTAATATATTATCCCTCTCAATCGGTGGCACCTCAGATCCTTATTTTCTCGATGCAATCGCGATTGGAGCTTTCGCTGCCACGAAGAGAGGGATATTTGTGTCTTGCTCCGCTGGGAATGGTGGTCCGACACCAGAATCACTTTCCAACGTGGCACCTTGGATTATAACCGTTGGGGCTGGGACCCTGGACCGGGATTTTCCGGCTTACGCGGTTCTTGGGAATAAAAAACGATTCACTGGTGTTTCACTTTATAGTGGGAAAGGGACTGGGAGTGAACCGGTGGGTTTGGTTTATAACAAGGGAGTGGAGTTGAACCAGACGAGTAGCATATGTACACCCGGCTCACTTGACCCGAAGCGGGTTCGTGGGAAGGTGGTTGTTTGTGACAGGGGAGTTATTGCGCGAGTGGAGAAAGGAGTCGTTGTGAAGAAAGCTGGCGGGGTTGGTATGATTTTGGCAAACACAGCAGAGAGTGGGGAGGAGTCTGTGGCGGACAGACATGTGTTGCCGACTGTGGCTGTGGGTAAAATAGCTGGAGATAAGATAAGGGAGTATGTTGGGTCAAATCCAAATCCGACGGTGGTTTTGAGTTTTGGTGGGACGGTTTTGGATGTCAAGCCAGCTCCAGTGGTGGCGGCGTTCAGTTCTAGAGGGCCAAATAATTTGACTCCTCAGATTCTGAAACCAGATGTTATTGGTCCTGGGGTTAATATATTGGCTGGGTGGATAGGTGTTGTTGAACCCTCTACCGTGCATACGGACACTTGTACATCACCCTTCAATATATTGTCAGGTACATCTATGTCTTGTCCACACATAAGTGGTTTGGCTGCACTGATAAAAGCAGCTCATCCAAAGTGGAGTCCTAGTGCAATCAAATCTGCACTATTAACAACAGCATATACCCTTGACAACACAAACACCACACTCCACGATGCCTCAGTAGGAGCCATTTCCACTCCATGGGCTCATGGCGCCGGCCATGTCGACCCACAGAAAGCGCTATCTCCTGGCCTTGTCTATGATGCATCAGCCGATGATTACATCACATTCTTGTGCTCCTTGAACTACACCCTAGAGCAAGTTCAAACGATTGCTCAGAACCCTAATGTCAATTGTTCTAGGAGATTCTCTGACCCTGGCCAACTCAATTACCCATCATTCTCAATCTTATTTAGAAGTAAGAAGAGGGTTGTTCGCTACACGCGTACCTTGACGAATGTTGGCGATGCCAATTCGGTCTATAGCGTGGTCGTTGATGGGCCATCGACTGTCAGTATATCTGTGAAACCTTCAAAGCTTGTGTTTGGGAAAGTACTTGAAAATAAAAGGTACACTGTGACATTTAAGTCTAAGAAACGTGTTGCTGTAAAGGATGCATTCGGTAGCATCACATGGACCAATTCACAACACCAAGTTAGGAGTCCAGTTGCTTTTACTTGGTCACGGTAG 1791 0.4768 MPDIPKRGVENVKAEGFPSSSCNKKLIGARSFYKGFEMAMRNRNGKGSEIIINSLEIRMVTGPILRALLLGPIGIARGMAPQARVAAYKVCWEEDCFSSDILAGMERAIEDGVNILSLSIGGTSDPYFLDAIAIGAFAATKRGIFVSCSAGNGGPTPESLSNVAPWIITVGAGTLDRDFPAYAVLGNKKRFTGVSLYSGKGTGSEPVGLVYNKGVELNQTSSICTPGSLDPKRVRGKVVVCDRGVIARVEKGVVVKKAGGVGMILANTAESGEESVADRHVLPTVAVGKIAGDKIREYVGSNPNPTVVLSFGGTVLDVKPAPVVAAFSSRGPNNLTPQILKPDVIGPGVNILAGWIGVVEPSTVHTDTCTSPFNILSGTSMSCPHISGLAALIKAAHPKWSPSAIKSALLTTAYTLDNTNTTLHDASVGAISTPWAHGAGHVDPQKALSPGLVYDASADDYITFLCSLNYTLEQVQTIAQNPNVNCSRRFSDPGQLNYPSFSILFRSKKRVVRYTRTLTNVGDANSVYSVVVDGPSTVSISVKPSKLVFGKVLENKRYTVTFKSKKRVAVKDAFGSITWTNSQHQVRSPVAFTWSR 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1142 596 PANTHER CUCUMISIN-RELATED 1 594 - -
Lal17g1142 596 Pfam Subtilase family 76 418 IPR000209 GO:0006508|GO:0008236
Lal17g1142 596 SUPERFAMILY Subtilisin-like 20 452 IPR036852 GO:0004252|GO:0006508
Lal17g1142 596 Pfam PA domain 222 295 IPR003137 -
Lal17g1142 596 ProSitePatterns Serine proteases, subtilase family, serine active site. 378 388 IPR023828 -
Lal17g1142 596 Gene3D - 176 316 - -
Lal17g1142 596 ProSiteProfiles Serine proteases, subtilase domain profile. 1 448 - -
Lal17g1142 596 CDD PA_subtilisin_like 182 307 - -
Lal17g1142 596 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 594 IPR045051 -
Lal17g1142 596 Gene3D - 465 594 - -
Lal17g1142 596 Gene3D Peptidase S8/S53 domain 18 461 IPR036852 GO:0004252|GO:0006508
Lal17g1142 596 Pfam Fibronectin type-III domain 495 591 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1142 Lal-Chr17 11649024 11651193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1142 1 596 Subtilisin-like Serine Gene Family AT2G05920 64.542 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1142 - - gmx:100797543 770.385