Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1118 ATGTACACCACCGCATACAGCGGTTTTGCCGCCTCCCTCACTTCTCACGAAGCCGATGAAATTCTCAAATCGGATTCTGTCATCGGAATTTACCAGGACACTCCCTATCAATTCCATACCACTCTTCTTGACACCGGAGTATTGCCGGAATCTAAAAGCTTTGATGATACAGGAATGCCGGATATACCTAAACGGTGGCGTGCAGAATGTGAAAGCGGAATTTCCTCCTCTTCGTGTAACAAGAAGCTCATTGGTGCTAGAAGCTTCTATAAAGGGTTCGAGATGGCAATGAGAAATATGAATGGTAAAGGGAGTGAGATAATAATTAATTCCCCTAGAGATACGGATGGTCACAGGACCCATACTGTGAGCACTGCTGCTGGGTCCCATGTGGCTAATGCTAGCTTTTTTGGTTTTGCCAGTGGCATTGCTCGTGGTATGGCCCCACAAGCACGTGTAGCAGCCTATAAGGTTTGCTGGGAGGAAGATTGTTTTTCATCTGACATCCTTGCTGGCATGGAACGTGCCATAGAGGATGGTGTTAATATATTATCCCTCTCAATCGGTGGCACCTCAGATCCTTATTTTCTCGATGCAATCGCGATTGGAGCTTTCGCTGCCACGAAGAGAGGGATATTTGTGTCTTTCTCCGCTGGGAATGGTGGTCCGACACCAGAATCACACTCCAACGTGGCACCTTGGATTATAACCGTTGGGGCTGGGACCCTGGACCGGGATTTTCCGGCTTACGCGGTTCTTGGGAATAAAAAACGATTCACTGGTGTTTCACTTTATAGTGGGAAAGGGATTGGGAGTGAACCGTGGGTTTGGTTTATAACAAGGGAGTGGAGTTGA 855 0.4749 MYTTAYSGFAASLTSHEADEILKSDSVIGIYQDTPYQFHTTLLDTGVLPESKSFDDTGMPDIPKRWRAECESGISSSSCNKKLIGARSFYKGFEMAMRNMNGKGSEIIINSPRDTDGHRTHTVSTAAGSHVANASFFGFASGIARGMAPQARVAAYKVCWEEDCFSSDILAGMERAIEDGVNILSLSIGGTSDPYFLDAIAIGAFAATKRGIFVSFSAGNGGPTPESHSNVAPWIITVGAGTLDRDFPAYAVLGNKKRFTGVSLYSGKGIGSEPWVWFITREWS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1118 284 ProSiteProfiles Serine proteases, subtilase domain profile. 1 284 - -
Lal17g1118 284 PANTHER CUCUMISIN-RELATED 42 276 - -
Lal17g1118 284 PANTHER CUCUMISIN-RELATED 2 41 - -
Lal17g1118 284 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 38 IPR037045 -
Lal17g1118 284 Pfam Peptidase inhibitor I9 2 39 IPR010259 -
Lal17g1118 284 Pfam Subtilase family 42 242 IPR000209 GO:0006508|GO:0008236
Lal17g1118 284 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 276 IPR045051 -
Lal17g1118 284 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 41 IPR045051 -
Lal17g1118 284 SUPERFAMILY Subtilisin-like 42 277 IPR036852 GO:0004252|GO:0006508
Lal17g1118 284 Gene3D Peptidase S8/S53 domain 39 272 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1118 Lal-Chr17 10315384 10316337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1118 2 274 Subtilisin-like Serine Gene Family AT2G05920 58.746 9.35e-107 325