Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1117 ATGATTTTGGAAAACACTGCAGAGAGTGGGGAGGACTCTGTGGCGGACAGACATGTGTTGCCGGCTGTGGCTGTGGGTAAAATAGTTGGAGATAAGATAAGGGAGTATGTTGGGTCAAATCCAAATCCGATGGTGGTTTTGAGTTTTGGTAGGATGGTTTTGGATGTCAAGCCAGCTTCAGTGGTTGCGGCGTTCAGTTCTAGAGGGCCAAATAATTTGACTCCTCAGATTCTGAAACCAGATGTTATTGGTCCTAGGGGTAATATATTGGCTGGGTGGATAGGTGTTGTTGAACCCTCTACCGTGCATACGGACACTCGTACATCACCCTTCAATATATTGTCAGCTACATTTATGTCTTGTCCACACATAAGTGGTTTGGCTGCACTGATAAAAGCAGCTCATCCAAAGTGGAGTCCTAGTGCAATCAAATCTGCACTATTAACAACAGCATATACCCTTGACAACACAAATACCACACTCCACGAAGCCTCAGTAGGAGCCATTTCCATTCCATGGGCTCATGGCGCCGGCCATGTCGACCCACAAAAAGCGCTATCTCATGGCCTTGTCTATGATGCATCAGCCGATGATTACATCACATTCTTGTGCTCCTTGAACTACACCCTAGAGCAAATTCAAACGATTGCTCAGAACCCTAATGTCAATTGTTCTAGGAGATTCTCTGACCCTGGCCAACTCAATTACCCATCATTCTCAATCTTATTTAGAAGTAAGAAGAGGGTTGTTCGCTACACGCGTACCTTGATGAATGTTGGTGATGCCAATTCGGACTATAGCGTGGTTGTTGATGGGCCATCTAGTTTACGCTTCTATACTCAAGCCAGAGTGTATGCTTCTATACTCAAGCCAGAGTGTATGCTTCTATACTCAAGCCAGAGTGTACGCTTCTATACTCAAGCCAGAGTGTATGCTTCTATACTCAAGCCAGAGTGTATGCTTCTATACTCAAGCCAGAGTCGCTAA 987 0.4509 MILENTAESGEDSVADRHVLPAVAVGKIVGDKIREYVGSNPNPMVVLSFGRMVLDVKPASVVAAFSSRGPNNLTPQILKPDVIGPRGNILAGWIGVVEPSTVHTDTRTSPFNILSATFMSCPHISGLAALIKAAHPKWSPSAIKSALLTTAYTLDNTNTTLHEASVGAISIPWAHGAGHVDPQKALSHGLVYDASADDYITFLCSLNYTLEQIQTIAQNPNVNCSRRFSDPGQLNYPSFSILFRSKKRVVRYTRTLMNVGDANSDYSVVVDGPSSLRFYTQARVYASILKPECMLLYSSQSVRFYTQARVYASILKPECMLLYSSQSR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1117 328 Gene3D - 203 290 - -
Lal17g1117 328 Pfam Subtilase family 50 156 IPR000209 GO:0006508|GO:0008236
Lal17g1117 328 ProSiteProfiles Serine proteases, subtilase domain profile. 1 186 - -
Lal17g1117 328 Gene3D Peptidase S8/S53 domain 55 199 IPR036852 GO:0004252|GO:0006508
Lal17g1117 328 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 278 IPR045051 -
Lal17g1117 328 CDD PA_subtilisin_like 1 45 - -
Lal17g1117 328 SUPERFAMILY Subtilisin-like 59 192 IPR036852 GO:0004252|GO:0006508
Lal17g1117 328 Pfam Fibronectin type-III domain 233 277 IPR041469 -
Lal17g1117 328 Gene3D - 10 54 - -
Lal17g1117 328 PANTHER CUCUMISIN-RELATED 1 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1117 Lal-Chr17 10313209 10315249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1117 1 276 Subtilisin-like Serine Gene Family AT2G05920 64.855 3.19e-123 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1117 - - han:110928438 374.4