Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1116 ATGAGTTATATTTCCATTACAATGTCTCCATTTTTTATTATCATCATTCTCTCATTATTGTCTCTATCTTCTTCAACATCCTTTGATTCTAAAAGTACTTACATTGTTCACACAAAACATCAAAATAAACCCGACATATATTCAACCCATCATGAATGGTACACCGCCACACTCTCTTCTCTCTCCACCATCGACTCCGACTCCAACCCCTTACTCTACACCTACACCACCGCATACAGCGGTTTTGCCGCCTCCCTCACTTCTCAAGAAGCCGATGAAATTCTCAAATCGGATTCTGTCATCGGAATATACCAGGACACTCCCTATCAACTTCATACCACTCGTACCCCTGAGTTCTTAGGACTCCAAACACGCTCAGGCTTACCCAAAGGACTTATCAATGAAACCCTCAACAAGCGTTTGCATGATATCATCATAGGAGTTCTTGACACCGGAGTATGGCCGGAATCTAAAAGCTTTGATGATACAGGAATGCCGGATATACCTAAACGGTGGCGTGGAGAATGTGAAAGCGGAAAGGATTTTCCCTCCTCTTCGTGTAACAAGAAGCTCATTGGTGCTAGAAGCTTCTATAAAGGGTTCGAGATGGCAATGAGAAATAGGAATGGTAAAGGGAGTGAGATAATAATTAATTCCCCTAGAGATACGGATGGTCACGGGACCCATACTGCGAGCACTGCTGCTGGGTCCCATGTGGCTAATGCTAGCTTTTTTGGTTTTGCCAGCGGCATTGCTCGTGGTATGGCCCCACAAGCACGTGTAGCAGCCTATAAGGTTTGCTGGGAGGAAGATTGTTTTTCATCTGACATCCTTGCTGGCATGGAACGTGCCATAGAGGATGGTGTTAATATATTATCCCTCTCAATCGGTGGCACCTCAGATCCTTATTTTCTCGATGCAATCGCGATTGGAGCTTTCGCTGCCACGAAGAGAGGGATATTTGTGTCTTGCTCCGCTGGGAATGGTGGTCCGACACCAGAATCACTTTCCAACGTGGCACCTTGGATTATAACCGTTGGGGCTGGGACCCTGGACCGGGATTTTCCGGCTTACGCGGTTCTTGGGAATAAAAAACGATTCACTGGTGTTTCACTTTATAGTGGGAAAGGGACTGGGAGTGAACCGGTGGGTTTGGTTTATAACAAGGGAGTGGAGTTGAACCAGACGAGTAGCATATGTACACCCGGCTCACTTGACCCGAAGCGGGTTCGTGGGAAGGTGGTTGTTTGTGACAGGGGAGTTATTGCGCGAGTGGAGAAAGGAGTCGTTGTGAAGAAAGCTGGCGGGGTTGGTATGATTTTGGCAAACACAGCAGAGAGTGGGGAGGAGTCTGTGGCGGACAGACATGTGTTGCCGACTGTGGCTGTGGGTAAAATAGCTGGAGATAAGATAAGGGAGTATGTTGGGTCAAATCCAAATCCGACGGTGGTTTTGAGTTTTGGTGGGACGGTTTTGGATGTCAAGCCAGCTCCAGTGGTGGCGGCGTTCAGTTCTAGAGGGCCAAATAATTTGACTCCTCAGATTCTGAAACCAGATGTTATTGGTCCTGGGGTTAATATATTGGCTGGGTGGATAGGTGTTGTTGAACCCTCTACCGTGCATACGGACACTCGTACATCACCCTTCAATATATTGTCAGGTACATCTATGTCTTGTCCACACATAAGTGGTTTGGCTGCACTGATAAAAGCAGCTCATCCAAAGTGGAGTCCTAGTGCAATCAAATCTGCACTATTAACAACAGCATATACCCTTGACAACACAAACACCACACTCCACGATGCCTCAGTAGGAGCCATTTCCACTCCATGGGCTCATGGCGCCGGCCATGTCGACCCACAGAAAGCGCTATCTCCTGGCCTTGTCTATGATGCATCAGCCGATGATTACATCACATTCTTGTGCTCCTTGAACTACACCCTAGAGCAAGTTCAAACGATTGCTCAGAACCCTAATGTCAATTGTTCTAGGAGATTCTCTGACCCTGGCCAACTCAATTACCCATCATTCTCAATCTTATTTAGAAGTAAGAAGAGGGTTGTTCGCTACACGCGTACCTTGACGAATGTTGGCGATGCCAATTCGGTCTATAGCGTGGTCGTTGATGGGCCATCGACTGTCAGTATATCTGTGAAACCTTCAAAGCTTGTGTTTGGGAAAGTACTTGAAAATAAAAGGTACACTGTGACATTTAAGTCTAAGAAACGTGTTGCTGTAAAGGATGCATTCGGTAGCATCACATGGACCAATTCACAACACCAAGTTAGGAGTCCAGTTGCTTTTACTTGGTCACGGTAG 2319 0.4649 MSYISITMSPFFIIIILSLLSLSSSTSFDSKSTYIVHTKHQNKPDIYSTHHEWYTATLSSLSTIDSDSNPLLYTYTTAYSGFAASLTSQEADEILKSDSVIGIYQDTPYQLHTTRTPEFLGLQTRSGLPKGLINETLNKRLHDIIIGVLDTGVWPESKSFDDTGMPDIPKRWRGECESGKDFPSSSCNKKLIGARSFYKGFEMAMRNRNGKGSEIIINSPRDTDGHGTHTASTAAGSHVANASFFGFASGIARGMAPQARVAAYKVCWEEDCFSSDILAGMERAIEDGVNILSLSIGGTSDPYFLDAIAIGAFAATKRGIFVSCSAGNGGPTPESLSNVAPWIITVGAGTLDRDFPAYAVLGNKKRFTGVSLYSGKGTGSEPVGLVYNKGVELNQTSSICTPGSLDPKRVRGKVVVCDRGVIARVEKGVVVKKAGGVGMILANTAESGEESVADRHVLPTVAVGKIAGDKIREYVGSNPNPTVVLSFGGTVLDVKPAPVVAAFSSRGPNNLTPQILKPDVIGPGVNILAGWIGVVEPSTVHTDTRTSPFNILSGTSMSCPHISGLAALIKAAHPKWSPSAIKSALLTTAYTLDNTNTTLHDASVGAISTPWAHGAGHVDPQKALSPGLVYDASADDYITFLCSLNYTLEQVQTIAQNPNVNCSRRFSDPGQLNYPSFSILFRSKKRVVRYTRTLTNVGDANSVYSVVVDGPSTVSISVKPSKLVFGKVLENKRYTVTFKSKKRVAVKDAFGSITWTNSQHQVRSPVAFTWSR 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1116 772 Pfam Fibronectin type-III domain 671 767 IPR041469 -
Lal17g1116 772 Pfam Peptidase inhibitor I9 33 112 IPR010259 -
Lal17g1116 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 770 IPR045051 -
Lal17g1116 772 SUPERFAMILY Subtilisin-like 111 628 IPR036852 GO:0004252|GO:0006508
Lal17g1116 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 112 IPR037045 -
Lal17g1116 772 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Lal17g1116 772 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Lal17g1116 772 PRINTS Subtilisin serine protease family (S8) signature 553 569 IPR015500 -
Lal17g1116 772 Gene3D - 641 770 - -
Lal17g1116 772 Pfam Subtilase family 143 594 IPR000209 GO:0006508|GO:0008236
Lal17g1116 772 CDD PA_subtilisin_like 358 483 - -
Lal17g1116 772 Pfam PA domain 398 471 IPR003137 -
Lal17g1116 772 PANTHER CUCUMISIN-RELATED 23 770 - -
Lal17g1116 772 CDD Peptidases_S8_3 109 590 IPR034197 -
Lal17g1116 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
Lal17g1116 772 ProSiteProfiles Serine proteases, subtilase domain profile. 108 624 - -
Lal17g1116 772 Gene3D - 352 492 - -
Lal17g1116 772 Gene3D Peptidase S8/S53 domain 143 637 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1116 Lal-Chr17 10299687 10302354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1116 30 772 Subtilisin-like Serine Gene Family AT2G05920 65.282 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1116 - - gmx:100797543 1025