Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1085 ATGGAAGAAGAAATGAACACGAATAATGAAACTCACTGTCAGGCAGAGGGTTTAGATGAATTTAATGGTAGTGAAGATGAAAATGTGAATGAAGTAGAGGAGTTAGATTTTGAAGAGATAAATTTTCGATTATTAAATGAAGATGAAGTGAAGAAATATAGGTTTTTAAACAATGATATCGCTTACAAATTTAATAAGATGTATGGTATGAAGAAAGGATTTGGCATTAGAAAATATCATACTCGGCGAAACAAGGATGGTGAAATTATATGGCAATCATTTTTTTGTGATAGGGAAGGATTTAGAGATAAGAAAAATGAATTGGTTCGGAAGAGGGCGCCGAGAAAAGAGACTAGATGTGGTTGTTTAGCAAGAATGAAAATCCACATTGACAATGAAAAAGGAGATTGGTATGTTAGTTATTTTGTTGATGAACATAATCATGAATTGGTGGGTGAACATTACGGTGCAATGATAGCCTCTAACCGAAGAATGACAGAGACAGACGTGGCTCAGATGAACACAATGAGAGAAGTGGGGATTGGGACAGGAAAAATATTTGGTTCGTTTGCCGGTCAATGTGGTGGATATCAGTATATTGGGTTCTCCAAGAAGGACATGTATAATCAAATTCAGAAGCAAAGAATAATAGGAAATGGTGACGCAGAATCAGCATTACAATACTTAAAGGACCAATCAAAATCAGATTGTGCAATGTATTGGAGACATATTGTAGATGAAGAAGGTAAGTTACAACAATTATTTTGGGCTGATGGATGCAGCATTTTCGACTACTCAATTTTTGGAGATGTTCTTGCTTTTGATGCAACTTATGGTCGAAACAAATACAAGTTCCCAGTTGTAATTTTTTCTGGTGTGAATCATCACAAGCAAACGACTGTGTTTGGCGCCGCTGTTGTGTCAAATGAGACAGAGGAAACATACATTTGGCTTTTGGAGAAATTTTTGGAGGCAATGATTGGGAAACAACCCAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAGAATGCAATCAAAAGAGTTTTTCCCGAAGCACACCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAAAATAACTTTCATAAGGATTTCCAAAAAGTTATGTATGCTGATGTTGATATTGATGATTTTAATATGATGTGGGAAGAACTTATTGCTAAGCATGGACTTCATAATAATGCATGGGCCGCTCAGATTTTTGATTGCAGAAGTATGTGGGCGAGGTCTTACATTCGAGGAAAGTTCTATGCTGGTTTGCATACTACATCACGTTGTGAGGGATTACACTCACAAATGGGGAGGTATATAGAATCTGGGTATAACGTTACTGAATTTCTACATCACTTTCAACGATGTCTAAGTCACATGAGGAACAATGAGGTGATGGAAGATTTTAAATCTTCATATGGTGATGAGTTGTTACAAACTCCTTATCATAATTTAGAGGGTCATGCTGCTTCGATATATACTAGGGTTGTTTTCAAAGAATTTCGTGCAGTTTTATTGGAAGCTGCAAAATTAAGGATTATTTCTACCCAACAAACATCGACTCATGTAATATACAAGATTGGGAAGCATTACAGTCCGAACAAGAAATGGCATGTATCACATTATGACAATGGCAGTATCGTGGACATTAAATGCTCGTGTAAAAGAATGGAATCTTTTGGGATGCCATGTAGTCGTAGTGTTTTTGTCTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTTGAAAGATGGACAAAGAAAGCGAAAGATGTTCAAGGTGTCAATTTCCAACAATGCGAATTAAGTAAAGAATCAGTTAATAGTAGTAGATATAGAGCTTTGAGTGATAGTTGTAGGGTGTTATGTAATCTTGCTTGCAAAACGGAGGAAGACTTTACTGAGATGCTGGAAAAAGTTTATAACGAATGTAGTAGACTCCGATCAAAACAATACTCTAGTGCGATGGAAAATGTTGACAATGCCACTGGAGATGAAGTAAGAGACCCAGTTCGAGTGCGTGCTAAAGGAAGAGTACCGGGGATTACCTCAAGGCCCAAGCGAGGTAATCATTGTGGTATATGTCGAGAAATTGGCCACAATAGGGCAAGTTGTCCAAATGTTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCGATGAAGAATGA 2214 0.3681 MEEEMNTNNETHCQAEGLDEFNGSEDENVNEVEELDFEEINFRLLNEDEVKKYRFLNNDIAYKFNKMYGMKKGFGIRKYHTRRNKDGEIIWQSFFCDREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDNEKGDWYVSYFVDEHNHELVGEHYGAMIASNRRMTETDVAQMNTMREVGIGTGKIFGSFAGQCGGYQYIGFSKKDMYNQIQKQRIIGNGDAESALQYLKDQSKSDCAMYWRHIVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFGAAVVSNETEETYIWLLEKFLEAMIGKQPKCVITDGDLSMKNAIKRVFPEAHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVDIDDFNMMWEELIAKHGLHNNAWAAQIFDCRSMWARSYIRGKFYAGLHTTSRCEGLHSQMGRYIESGYNVTEFLHHFQRCLSHMRNNEVMEDFKSSYGDELLQTPYHNLEGHAASIYTRVVFKEFRAVLLEAAKLRIISTQQTSTHVIYKIGKHYSPNKKWHVSHYDNGSIVDIKCSCKRMESFGMPCSRSVFVLLILDISQLPSCLVLERWTKKAKDVQGVNFQQCELSKESVNSSRYRALSDSCRVLCNLACKTEEDFTEMLEKVYNECSRLRSKQYSSAMENVDNATGDEVRDPVRVRAKGRVPGITSRPKRGNHCGICREIGHNRASCPNVVGSCSRTFDNDFDEE 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1085 737 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 53 664 IPR031052 GO:0006355
Lal17g1085 737 Pfam MULE transposase domain 271 365 IPR018289 -
Lal17g1085 737 Pfam FAR1 DNA-binding domain 64 151 IPR004330 -
Lal17g1085 737 PANTHER OS02G0262500 PROTEIN 53 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1085 Lal-Chr17 9529595 9531899 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal17g1085 MULE 3.6e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1085 - - lang:109350553 652.129