Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1073 ATGAAGGGTGTGAGTAGGATAAAAAAGAAGCTGCATTTTAGCAAAATCTATACATTTGGTCGTGGTAAAACAACCTTCAAGGGAGATCATTCACATATTGGGGAACATGGCTTTTCCAGGGTAGTCTTTTTTAATGAACCGGATAGATTCGATGGCGAAATTAGGGATTATGCAGATAATTCTGTTAGGTCTACAAAATACACTGTTGCCAATTTCGTGCCGAAATCACTGTTTGAGCAGTTTAGGAGGGTAGCTAATTTCTTTTTCTTGGTAATCGGCGTCTTGGCGCTTACACAGCTTGCTCCTTATACAGCTGTCAGTGCTATCCTTCCTCTGTGTGTCATTGTCGGGGCAACTATGGTGAAAGAGGGCGTTGAAGATTGGCGTAGGAAAACGCAGGATATTGAGGTGAACAATAGAAAAGTTAAAGTGCATAAAGGTGATGGCATTTTCGAATATACTGAGTGGAAGAATCTGAGAGTGGGGAATATAGTGAAGATAGAAAAGGATGGATTCTTCCCTGCAGATCTCCTACTACTTTCATCCAGTTATGAGGATGCGGTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTGAAGTTAAAACAAGGATTGGATGTAACTTCTTCCTTATATGAGGACATCGAATTCCGTGATTTTAAAGCTACCGTCAAATGTGAAGATCCAAATGCTAATTTGTACACATTTGTTGGGAGCATGGAGTTTGAAGAACAAAAGTATCCCCTATCTCCACAGCAACTTCTTCTAAGAGACTCCAAACTTCGTAATACAGACTTCATATTTGGAGCAGTCATTTTCACCGGTCATGACACGAAGGTTATTCAAAACTCTGTTGACCCCCCTTCAAAAAGAAGCAAAATTGAGAAGAAGATGGATAAAGTTATATATTTCTTGTTTTGTATTCTAATTCTAATTGCTTTTGTTGGATCTATTCTCTTTGGCATTATAACTAAAGATGATTTGGATAATGGATTGATGAAAAGATGGTATCTAAGACCAGATGATTCCACAATTTTCTTTGATCCAAAAAGAGCAGCTGCAGCTGCTACATTTCATTTTTTGACGGCCTTGATGTTATATGGCTTCTTCATTCCAATTTCTTTGTATTTTTCAATAGAAATTGTCAAAGTCCTTCAGAGCATCTTCATAAATCAAGATATCCATATGTACTCTGAAGAAGCTGACAAGCCAGCCCATGCTCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTAACACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTGTTGCTGGAGTACCTTATGGTCGTACTGTTACAGAGGTTGACAAGGCTATGAGTAGAAGAAATGGTTCAACTTTGAGTGATGAGCATGCTAATGGGTCAGAATCAGGTGAATTCAGGGAACCACCTGATCTGAAAGCACCCATCAGAGGTTTTAACTTTAAAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCCTATTCAGATGTTGTCCAGAATTTTTTTCGTTTATTGGCAATCTGTCACACTGCCATACCAGAAGTGGATGATCACACAGGAAATGTCTCATATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAGTTGGTTTTGAATTCTACAAAAGGACTCAGACTAGTTTATCAATGTATGAGCTGGATCCAGTTTCTGGTGATAAAGTGGAAAGGACGTATGAGCTTCTCCATGTTTTAGAATTCAATAGCTCAAGGAAGAGAATGTCAGTGATAGTGAAAAATGAAGGGAGAATTCTGTTATTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTTCCGTTAATGGGAGAGAGTTTGAAGGAAAAACCTTGGAACACGTACAGGAATATGCTGATGCAGGTCTAAGAACCTTAATACTGGCTTATCGTGAACTCGATGAAGAAAAATACAAAGAGTTTGCTACTAAATTTTCTGAAGTAAAAAATTTAGTTACTGAACATCGGGAAACACTTATTGAGGAAGTATCCGATAAGGTTGAGAAAGATCTAATCCTTTTGGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGCATTGACAAGCTTTCCAAAGCTGGAATTAAGATCTGGGTCTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTGCTTAGACAAGGTATGAAACAAATTATAATTCATTTGGAGATTCCGGAAATACAAGCATTGGAGAAGGGTGGAGACAAGACAGCCATCGCCAAGGCATCAAGGGAATGTGTCCACCTTCAGATATCTGAAGGTGCTCGACAGATTACTGCAAACACAGGGACCTCTCACCTGGAATTTGCCCTGATTATTGATGGAAAATCACTTGCTTATGCTCTAGAGGATAATATGAAGAACACGTTTCTAGAGCTTGCAATTCATTGTGCATCTGTTATCTGCTGTCGTTCATCGCCAAAGCAGAAGGCACTGGTAACCAGGCTGGTCAAATCTGGAACTGGTAAAACAACATTAGCTATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGTATTGGAATCAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGGTATTTGGAACGATTACTTCTTGTACATGGTCATTGGTGTTACCGGAGGATGTCATCCATGATATGCTATTTTTTCTACAAGAATATAACATTTGGCTTCACTATGTTCTTATATGAGGTGTATGCATCATTCTCCGGAGAGCCTGCATACAATGATTGGTTTTTGTCTCTCTACAGTATTTTATTTTCATCACTTCCTGTGATTGCCCTTGGGGTCTTTGATCAGGATGTATCTGCTAGGTACTGTCTCAAGTTTCCTATCTTATACCAAGAAGGTGTACAAAATCTCCTCTTTAGGTGGCGTCGAATTCTTAGCTGGATGCTTAATGGTTTTATTAGTGCCATAATGATTTTCTTCTTCTGCAAAAAAACAATGGAGCTCCAGGCGTATGATGCAGAGGGAAGAACCGCAGGGAGGGATATATTAGGAGCATCGATGTATACTTGCGTGGTTTGGGTCGTAAACTTGCAGATGGCACTTTCTCTAAGGTACTTCACCTTGATACAACATATTGTCATCTGGGGTTCTATTGCTCTATGGTATATTTTCCTCATGGTATATGGAGCAATGCCTCCAAACCTTTCTAAAAATGCATACAAAGTCTTCATTGAAACTCTAGCTCCTTCTGCTTCCTATTGGATTCTGACTCTCTTTGTATCCATCACAACCTTAATACCATACATCTCTTGCTCAGCAATTAAGACGAGGTTCTTTCCTATGTATCATGACATGGTACAGCACATAAGGTATAATAACAAGGGATTGAGGCTAACATCTTTGACTTCAACAGCAGGCTTTGGTATAGTAAAGCTCCTAAAAAATAAGAGGCAGTGTGGTAGAGTGGCAGTTGGCTGTGTAATA 3567 0.3967 MKGVSRIKKKLHFSKIYTFGRGKTTFKGDHSHIGEHGFSRVVFFNEPDRFDGEIRDYADNSVRSTKYTVANFVPKSLFEQFRRVANFFFLVIGVLALTQLAPYTAVSAILPLCVIVGATMVKEGVEDWRRKTQDIEVNNRKVKVHKGDGIFEYTEWKNLRVGNIVKIEKDGFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLYEDIEFRDFKATVKCEDPNANLYTFVGSMEFEEQKYPLSPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSVDPPSKRSKIEKKMDKVIYFLFCILILIAFVGSILFGIITKDDLDNGLMKRWYLRPDDSTIFFDPKRAAAAATFHFLTALMLYGFFIPISLYFSIEIVKVLQSIFINQDIHMYSEEADKPAHARTSNLNEELGQVNTILSDKTGTLTCNSMEFIKCSVAGVPYGRTVTEVDKAMSRRNGSTLSDEHANGSESGEFREPPDLKAPIRGFNFKDERIMNGNWVNEPYSDVVQNFFRLLAICHTAIPEVDDHTGNVSYEAESPDEAAFVIAAREVGFEFYKRTQTSLSMYELDPVSGDKVERTYELLHVLEFNSSRKRMSVIVKNEGRILLFCKGADSVMFERLSVNGREFEGKTLEHVQEYADAGLRTLILAYRELDEEKYKEFATKFSEVKNLVTEHRETLIEEVSDKVEKDLILLGATAVEDKLQNGVPDCIDKLSKAGIKIWVLTGDKMETAINIGLLRQGMKQIIIHLEIPEIQALEKGGDKTAIAKASRECVHLQISEGARQITANTGTSHLEFALIIDGKSLAYALEDNMKNTFLELAIHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRMSSMICYFFYKNITFGFTMFLYEVYASFSGEPAYNDWFLSLYSILFSSLPVIALGVFDQDVSARYCLKFPILYQEGVQNLLFRWRRILSWMLNGFISAIMIFFFCKKTMELQAYDAEGRTAGRDILGASMYTCVVWVVNLQMALSLRYFTLIQHIVIWGSIALWYIFLMVYGAMPPNLSKNAYKVFIETLAPSASYWILTLFVSITTLIPYISCSAIKTRFFPMYHDMVQHIRYNNKGLRLTSLTSTAGFGIVKLLKNKRQCGRVAVGCVI 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1073 1189 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1149 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal17g1073 1189 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1141 IPR032630 -
Lal17g1073 1189 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Lal17g1073 1189 SFLD Haloacid Dehalogenase 408 914 - -
Lal17g1073 1189 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 8 1155 - -
Lal17g1073 1189 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 831 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal17g1073 1189 SFLD p-type atpase 408 914 IPR044492 -
Lal17g1073 1189 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 8 1155 - -
Lal17g1073 1189 Gene3D - 545 702 IPR023299 GO:0000166
Lal17g1073 1189 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Lal17g1073 1189 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Lal17g1073 1189 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1141 IPR023298 -
Lal17g1073 1189 SUPERFAMILY HAD-like 421 918 IPR036412 -
Lal17g1073 1189 Pfam Phospholipid-translocating ATPase N-terminal 53 108 IPR032631 -
Lal17g1073 1189 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 704 IPR023299 GO:0000166
Lal17g1073 1189 MobiDBLite consensus disorder prediction 461 475 - -
Lal17g1073 1189 CDD P-type_ATPase_APLT_Dnf-like 59 1023 - -
Lal17g1073 1189 Pfam Cation transport ATPase (P-type) 537 628 - -
Lal17g1073 1189 MobiDBLite consensus disorder prediction 461 485 - -
Lal17g1073 1189 Gene3D - 118 287 - -
Lal17g1073 1189 Gene3D - 703 903 IPR023214 -
Lal17g1073 1189 SUPERFAMILY Calcium ATPase, transduction domain A 141 284 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1073 Lal-Chr17 9379366 9398327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1073 3 1155 Primary Pumps ATPases AT1G68710 71.188 0.0 1760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1073 K01530 - gmx:100798329 1903.64