Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1070 ATGGATCCTGAGGAAGTTAATTTGAACAGAGAAAGTGGGAAAAGTAGTGATGGATTTGTTGATAGAAGTAAAGTACGGATTTTATTGTGTGATAACGATTCCAAGAGTTCTCAAGAGGTTTTTACTCTTCTTCTCAGATGCTCTTATCAGGTTACATCCGTAAAGTCAGCCAGGCAGGTGATTGATGCACTGAATGCAGAGGGCCAACATATAGATATCATACTTGCTGAACTTGATCTTCCAATGAAGAAAGGTATGAAGATGTTAAAGTACATAGCACGGGACAAAGAATTGCGCAGAATTCCTGTCATAATGATGTCCGCACAAGATGAGGTATCCACTGTTGTTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTGCGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAATTATGACTTTGATCTGGTGGCATCAGACCCTAGTGATGCCAATACAACCAGTACGACCTTGTTTTCTGATGACACAGATGACAAGTCCAAGAGAAGCACTAATCCAGAGACAGGAATGTCAACCCAACAAGAGCTAGAGTCTAATATTGCCATTGCTGCTGCTGTTGTTGAGGTGCCACCCGACGTTCATGCATCAGAGTGTCGACCTGATGTGCCTAGAATTAGTGATCTCCGAACAGGACATTTTTCATCTGGTCCAAAGAAGAGTGAACTAAGGATTGGGGAGTCATCAGCCTTCTTCACTTATGTTAAAGCATCCGTGTCAAAGAGCAAGTTTGAAGGAATTGTTCATGTTGACAACAATGCTGCTATACGCATGAGGGTGGAAGATGCACATCAATCATGTGCCCAACAACGGGTTATTGACCTTCAAACACATGCAAATGGAGAGACCTGTGAGAGTCAATCACAAGATGACTTTCCCAGCAGCAATAGTTTTCCTGATTCTTTCTCTATAGAGAGGTTTTGTACTCCACCTGCATCTATGGAAGTTTCGCCGCAAAATCACTCCAAGGAAGAAAATCTGCCTCCAGGTGTGGTGCATCCAAGAAATGGAACTCATGGTTCTGAGGTTGATGTTTCTATGATGGCTACTCAACATGCTTATCCATGTTATATTTCTGGAGGTTTTAATCATGTTATGATGCCCTCATCAGCACAAATGTATCAAAAGAATATCCAGAACCTGCAGAATCAGGCTTGTTCAGCTATGATTGCTCAATATAATCATCTCCCCCAAGGTCCTCCACATGCAATGGGGATGACATCCTACCCATATTACCCGATGAGTACATACTTACAACCTGGTCAGATTCCTACATCTCATCCATGGCCATCATTTGGAGGTTCAAGTTCATCTGAAGCAAGATTAAGTATAGGTGATAGGAGAGAAGCAGCATTGATAAAATTTAGACAGAAAAGAAAAGAGCGTTGCTTTGATAAGAAAATCAGATATGTTAATCGGAAACGACTTGCTGAGCGTCGGCCTCGTGTGAAGGGACAGTTTGTCAGAAAGTTAAATGGCGCTAATGTGGATCTTAATGGACAACCTGCTTCCATTGACTATGACGAAAATGTTGACGAGGAAGATGAGCAGGGAGCAAGAGATTCCTCTCCTGAGGATGCTTGA 1665 0.4234 MDPEEVNLNRESGKSSDGFVDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDIILAELDLPMKKGMKMLKYIARDKELRRIPVIMMSAQDEVSTVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILNYDFDLVASDPSDANTTSTTLFSDDTDDKSKRSTNPETGMSTQQELESNIAIAAAVVEVPPDVHASECRPDVPRISDLRTGHFSSGPKKSELRIGESSAFFTYVKASVSKSKFEGIVHVDNNAAIRMRVEDAHQSCAQQRVIDLQTHANGETCESQSQDDFPSSNSFPDSFSIERFCTPPASMEVSPQNHSKEENLPPGVVHPRNGTHGSEVDVSMMATQHAYPCYISGGFNHVMMPSSAQMYQKNIQNLQNQACSAMIAQYNHLPQGPPHAMGMTSYPYYPMSTYLQPGQIPTSHPWPSFGGSSSSEARLSIGDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVKGQFVRKLNGANVDLNGQPASIDYDENVDEEDEQGARDSSPEDA 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1070 554 ProSiteProfiles Response regulatory domain profile. 26 144 IPR001789 GO:0000160
Lal17g1070 554 SMART REC_2 25 140 IPR001789 GO:0000160
Lal17g1070 554 Pfam CCT motif 475 517 IPR010402 GO:0005515
Lal17g1070 554 Pfam Response regulator receiver domain 27 138 IPR001789 GO:0000160
Lal17g1070 554 Gene3D - 25 230 - -
Lal17g1070 554 MobiDBLite consensus disorder prediction 173 203 - -
Lal17g1070 554 MobiDBLite consensus disorder prediction 522 554 - -
Lal17g1070 554 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 5 538 - -
Lal17g1070 554 SUPERFAMILY CheY-like 21 150 IPR011006 -
Lal17g1070 554 MobiDBLite consensus disorder prediction 534 554 - -
Lal17g1070 554 ProSiteProfiles CCT domain profile. 475 517 IPR010402 GO:0005515
Lal17g1070 554 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 538 IPR045279 GO:0009736
Lal17g1070 554 MobiDBLite consensus disorder prediction 340 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1070 Lal-Chr17 9292103 9298537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1070 6 553 Response Regulator Gene Family AT5G61380 48.788 6.85e-171 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lal17g1070 Response_reg 1.3e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1070 K12127 - gmx:100271889 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1070 17 9292103 9298537 Lal17g1070 17 9292103 9298537 ECH