Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1044 ATGATTCTGCATTTTACATTTCATATAATAATTTTGATAATATTGCCTCTATATTCATTAGCAGCAGAGATTATAGCACAACCTGGTTGTGATTCAAAATGTGGAAATGTCTCCATCCCTTATCCATTTGGAATGAAAGATCCAAATTGCTATGTGGACAAGTGGTTTGAGATAGAATGCAGATACAATAGTACTTCTAATTCTGGTCATAAACCTTACCTTAAATCTCTGAATTTGGAGGTGTCATACCTTAGTTTTGATGATTATAATATTTGGATAAGGAATCCAGTCTTCTATTCGAATTGCGATGGTAAAACTAATAAGCCAGTCATAGACCTGAAAGGAAGTCCTTTCAGGTATTCCCAAGATAAAAACATATTTATGGCCTATGGTTGCAGCAAACTTGCTTTTATGCATTCAGATGGGTCAACAATTGGTGGTTGTGTGTCTATTTGTGATGCCAATGACCAAAGCCTCAATGGACGCATTGATTGCAACGGCATCTCCTGCTGCGAGACTTCACTACCTTTGCACCTTTCAGAATATAATGTAACACTTTCAGATCTTAATAACAAAAGGTTGGGATCTGTTATTTTACTCTTTGGTCTATGGTGGACATATAAAGCTGTAAGAAAAAGAGTGATAAAGAATCGCAAAGAAAAGTTCTTCAAACGAAACGGAGGTTTGTGGTTACAACAAAGATTGTCTTCTGCAGATGTTAGTGTTCCCAAAATACTCTATACCTTAAAGGACATAGAAAAGGCCACAGACAACTTTAATATGAATAGAGTTCTTGGAAAGGGGGTGAAAAAGTTTAAGGTCCAAGAAAAGGTTGAAGAATTCATCAATGAATTTGCTGTTCTTTCACAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGATGTTGTTTGGAGACAAAAATTCCTTTGCTTGTTTATGAATTCATTCCCAATGGCAACCTTTTCGAATATTTACATGTCCAAAATGAAGAGTTGCCAGTGACGTGGGATATCCATTTAAGAATTGCGAAGGAAATTGCAGGAGCTCTATTTTACCTACATTCCATTGCTTCTCAGCCCATTTATCATAGAGACATAAAATCAACAAATATACTACTGGATGAAAAGTATAGGGCAAAAGTAGCAGACTTTGGAACTTCAAGAGTAGTTTCCATGGAAGCTACTCACCTCACAACAGTAGTTCAAGATAAAAGTGATGTCTACAGTTTTGGTGTAGTTCTTGCAGAGCTTTTAACTGGTAAAAAGCCAATATCTTTGTTAATTTGTGAGGAAGCAAGGAATTTAGCTTCATATTTTGTTCTCTCTATGGAGGAGAATCAGTTGTTTGAGATTATTGACAAAAGAGTGGCAGAGGAAGCACAGAAAGAACAGATCACTGCAGTTGCCAATCTTGCATTTACATGTTTAGAGTTGAATGGGAGAAAACGACCAAATATGAAAGAAGTCACATTGGAACTAGAAAGGATACAAAGGCAAGATAGAAGGTTTAGTGCAAAGCAAAACCATGAAGAAATAGAGCTTGCAAGAACTGAAGACAACCAATCTTTTGATGGATATTCCATGTCTAATACATTGTCCATTATCAACAGTGAAACAGAGTTGTTGTTGCTGCTTTTTCAAGGGCTACCTGGTCAATTTTGTTATTGTGTTGATATGAACAAATTCAACCAATATAAATCCGAGTTGAGTAGTGCAAAAGACTAA 1725 0.3588 MILHFTFHIIILIILPLYSLAAEIIAQPGCDSKCGNVSIPYPFGMKDPNCYVDKWFEIECRYNSTSNSGHKPYLKSLNLEVSYLSFDDYNIWIRNPVFYSNCDGKTNKPVIDLKGSPFRYSQDKNIFMAYGCSKLAFMHSDGSTIGGCVSICDANDQSLNGRIDCNGISCCETSLPLHLSEYNVTLSDLNNKRLGSVILLFGLWWTYKAVRKRVIKNRKEKFFKRNGGLWLQQRLSSADVSVPKILYTLKDIEKATDNFNMNRVLGKGVKKFKVQEKVEEFINEFAVLSQINHRNVVKLLGCCLETKIPLLVYEFIPNGNLFEYLHVQNEELPVTWDIHLRIAKEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKVADFGTSRVVSMEATHLTTVVQDKSDVYSFGVVLAELLTGKKPISLLICEEARNLASYFVLSMEENQLFEIIDKRVAEEAQKEQITAVANLAFTCLELNGRKRPNMKEVTLELERIQRQDRRFSAKQNHEEIELARTEDNQSFDGYSMSNTLSIINSETELLLLLFQGLPGQFCYCVDMNKFNQYKSELSSAKD 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1044 574 Pfam Protein tyrosine and serine/threonine kinase 262 492 IPR001245 GO:0004672|GO:0006468
Lal17g1044 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
Lal17g1044 574 SMART serkin_6 259 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1044 574 Gene3D Transferase(Phosphotransferase) domain 1 320 522 - -
Lal17g1044 574 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
Lal17g1044 574 SUPERFAMILY Protein kinase-like (PK-like) 243 491 IPR011009 -
Lal17g1044 574 Gene3D Phosphorylase Kinase; domain 1 254 319 - -
Lal17g1044 574 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 198 540 IPR045274 GO:0007166
Lal17g1044 574 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 183 IPR045274 GO:0007166
Lal17g1044 574 ProSiteProfiles Protein kinase domain profile. 183 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g1044 574 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 23 183 - -
Lal17g1044 574 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 198 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1044 Lal-Chr17 8904258 8906452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1044 123 497 Receptor kinase-like Gene Family AT1G69730 49.173 6.67e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal17g1044 Pkinase 6.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1044 - - lang:109329470 551.977