Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1039 ATGGCCACCGTTACAACACAGGCTTCTGCTGCTATTTTCCGACCATGTGCTTCTAAATCTAGGTTTCTCAGTAGCACTTCTGGTAAATTCAATAGGGAAGTAGCTTTTAGGCCAGTGGGTTCTCCTGCTTCTACTTCTTTCAAGGTTAAAGCTAAGAAAGGAGAGTGGCTACCAGGACTAGCTTCCCCTGGTTACCTCAACGGCAGTCTTGCTGGTGACAATGGGTTTGATCCTCTGGGTCTTGCTGAGGACCCAGAGAACTTGAAGTGGTTTGTTCAAGCTGAGCTTGTGAATGGACGTTGGGCCATGTTGGGTGTTGCAGGAATGTTACTTCCAGAGGTCTTTACCAACATTGGAATCATTAATGTTCCTAAGTGGTATGATGCAGGGAAAGAAGAATACTTTGCATCATCCTCAACCCTCTTTGTGGTTGAGTTCATTTTGTTCCATTATGTGGAAATCAGAAGGTGGCAGGACATTAAAAACCCTGGAAGTGTTAACCAAGATCCCATCTTTAAACAATACAGCTTGCCCCCAAATGATGTTGGCTACCCTGGTGGCATTTTTAACCCCTTGAACTTTGCACCAACTCAGGAGGCCAAAGAGAAGGAAATTGCAAATGGGAGATTGGCAATGTTAGCATTCTTGGGATTTATAATTCAGCACAATGTGACAGGCAAAGGACCATTTGATAACCTCCTTCAGCATCTCTCTGACCCATGGCACAACACCATTGTCCAAACACTCAGTGGCAACTAA 759 0.4466 MATVTTQASAAIFRPCASKSRFLSSTSGKFNREVAFRPVGSPASTSFKVKAKKGEWLPGLASPGYLNGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVVEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTQEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHLSDPWHNTIVQTLSGN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1039 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Lal17g1039 252 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 250 - -
Lal17g1039 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 250 IPR001344 GO:0009765|GO:0016020
Lal17g1039 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Lal17g1039 252 SUPERFAMILY Chlorophyll a-b binding protein 52 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1039 Lal-Chr17 8793941 8796513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1039 56 250 Chloroplast and Mitochondria Gene Families AT3G61470 56.219 1.46e-75 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1039 K08910 - pvy:116133502 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1039 17 8793941 8796513 Lal17g1039 17 8793941 8796513 ECH