Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1034 ATGGACTTGAGAGAAGCAGATGCAATTCATGAAAATATTGCTAGTAAGCTTATTCCAAAAATTGGAATGGAATTTGAGTGTGAAGATGCAACTTACACTTTTTACAATTATTATGCTTATAAAGTGGGTTTTAGCATAAGGAGAGGAAGAAGTCACAAAGCCATTGATGGTCAAGTAGTAGATCGACTACTTTTTTGTTCATGTGAAGGTCATCGTGTAAATGACAAACGAGATGTTTATGTGAGAAAACATCGTGATCAAACAAGATTTGGTTGTTTAGCTAGAATGAAAATAAGTAATCGTTTGACTGGAAAGTTATCTATTACTGAATTTATTGGTGAACATAATCATCAAACATCTACCCCTATTGAAGTGGATTTAGCTGAGAGTTGTGGAATCACTCCAAAAGCAAGTTGTGAATTAATGGCTAGGCAAGCTGGTGGGCGTGAAAATCTTGGTTTCATCCCAGACGATTACATGAATTATTTACACTCTAAGAGAACAATTCAGATGAGGACAGGAGACACAATTGATGAGGATGATTTAATAACTAATATTTTTTGGGCTGATGCAAAAATGATGGTTGACTACTCATATTTTGGTGATATAGTTTGTTTTGATACTACTTACAGAAAAAATAGAGAAGGTCGTCCGTTTGCAATGTTTGTTGGGGTCAATCATCACAAACTAAGTATTATCTTTGGTGCAACATTGTTATATGATGAGACGGCCGAAACATTTGTTTGGTTGTTTAATACTTTTTCCAAAGCCATGTTAGGAAAAAACCACAAACTATCCTCACCGATCAAGATGCAGCGATGGCATAAGCTCTAA 834 0.3525 MDLREADAIHENIASKLIPKIGMEFECEDATYTFYNYYAYKVGFSIRRGRSHKAIDGQVVDRLLFCSCEGHRVNDKRDVYVRKHRDQTRFGCLARMKISNRLTGKLSITEFIGEHNHQTSTPIEVDLAESCGITPKASCELMARQAGGRENLGFIPDDYMNYLHSKRTIQMRTGDTIDEDDLITNIFWADAKMMVDYSYFGDIVCFDTTYRKNREGRPFAMFVGVNHHKLSIIFGATLLYDETAETFVWLFNTFSKAMLGKNHKLSSPIKMQRWHKL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1034 277 Pfam FAR1 DNA-binding domain 33 119 IPR004330 -
Lal17g1034 277 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 134 IPR031052 GO:0006355
Lal17g1034 277 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 177 264 IPR031052 GO:0006355
Lal17g1034 277 PANTHER OS03G0181600 PROTEIN 8 134 - -
Lal17g1034 277 PANTHER OS03G0181600 PROTEIN 177 264 - -
Lal17g1034 277 Pfam MULE transposase domain 203 260 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1034 Lal-Chr17 8685308 8686256 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal17g1034 FAR1 7.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1034 K17604 - ccaj:109817905 374.015