Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1027 ATGAAGAAGAGACAAGTGGTGATGAAAAGAGATGTGGCCAGTAACACTTCATCTTCAGTGATAAGAAATATTAGATATGGGGAGTGCCAGAAGAATCATGCAGCCAATATTGGAGGGTATGCTGTGGATGGGTGTAGAGAATTCATGGCAAGTGCAGGGGGAGGAACTAATGGTGCTCTTACATGTGCAGCTTGTGGCTGCCACAGGAACTTTCACAGAAGGGAAGTTCAAACTGAGGTAGTTTGTGAGTACTCTCCCCCTAATTCTGGTCGCTGA 276 0.4565 MKKRQVVMKRDVASNTSSSVIRNIRYGECQKNHAANIGGYAVDGCREFMASAGGGTNGALTCAACGCHRNFHRREVQTEVVCEYSPPNSGR 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1027 91 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 25 76 IPR006456 -
Lal17g1027 91 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 26 75 IPR006456 -
Lal17g1027 91 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 88 - -
Lal17g1027 91 Pfam ZF-HD protein dimerisation region 24 76 IPR006456 -
Lal17g1027 91 PANTHER MINI ZINC FINGER PROTEIN 3 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1027 Lal-Chr17 8546044 8546319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1027 1 89 Zinc finger-homeobox gene family AT1G18835 76.404 1.06e-42 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lal17g1027 ZF-HD_dimer 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1027 - - rcu:8263435 166.777