Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1007 ATGAAAAATTCACCCAATGAACACACCTTCTGGACTCAAGCAAACGCTCTACTTAGGAAGAATTTAACTTACCAGAGACGAAATGTAAAGACCAATGTTCGGCTCATATTGTTCCCCTTTGTACTGTGTTTGTTACTGCTTCTCCTCCAAAAGTTGATTGAAAAGCAATTATTGGATAAGGCTGAAAACAAGTGTGGATGTATTTGTACCAAGACACAAGGGGATAAGTGCCTTGAGAAGGAGTGTGGAATTCAATATTCAGATTTGGCTCAAGTTGGCACTTGTTCTATTCCCAATCCTCCAGAATGGCCTCCTTTGTTGCAAGTGCCTGTTCCACAATGTCGGGCTGTGAAATCGGATTTTTTTCCGTTTTCGGATTTACCAGACAAGTCCTGCAGGAGGAATGGCTCATGTCCTATCACTATCTTCTTCACTGGCAATAATAAGTCTTTTGGAGAAATTTTGTATGAGAATATGCTCCCAAGTACATTGACAATAAATATCTCAGATATTATGGGTAGCTTGGCATTAAACGTCCTGGGATCAGCAACAAAGCCAGAATACTCCAATTTTTTTGAACCTTCTTTCTTTTCGGATCTTCCCATTTATTATCTACAAAGTCAATGCAGACAGAACTCTACATTCTCCATTCCTGTCCAGATAGCATCCATTAGTTTGCAGAAAGAGGTAAGATGTGCTCAGGGGTTACGTTTATGGCGTAATAGTTCATCTGAGGTGAATAATGAGCTATATAAAGGTTATTATAGATCTAACACAGGGAGACAGATCAATGAGATATCTGCGGGTTATGATTTTCTAAATTCAAATGGGAATAAATTTAATGTCAGCATATGGTACAACTCAACCTACAAAAATAGTACTGGCTCTCGTCGTATTGCATTGGCTCGGATTCCTCGTTCCATAAATATGGTATCTAATGCTTACGTTCAGTTTCTACTGGGACCTAGTAACAAAATATTGTTCGAGTTTGTAAAGGAAATGCCAAAACTTGAGACCCCAAATAAGTTTGATTTGGCTTCTCTCTTAGGTCCTCTCTTCTTTACATGGGTCATCCTGCAACTTTTCCCTGTTGCATTAATATCGTTAGTATACGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGTTGATTTCATATGGTTACTTTCTTGCATTATCTGTAGTCTACATGCTGTGTTTTGTGATATTTGGCTCAGTCATAGGGTTAAAATTCTTCACAATGAATGACTACAGCATCCAATTAGTGTTTTATTTCATCTATATAAATTTACAAATTTCATGGGCATTTCTATTGTCTTCAGTTTTTTCAAATGTTAAGACTGCTACAGTAACTGCATATATAGGCTTGTTTGGAAGTGGGTTGTTGGCTGGCTTTCTTTTCCAAATTTTTGTTCAAGATACATCATTTCCAAGAGGGTGGATCATGGTTATGGAGTTGTATCCTGGGTTTTCTTTATATCGTGGGTTATATGAGTTTTCGCAGTCTTCTTTCACTGGCGATACTATGGGGACTCATGGTATGCGGTGGGGAGATCTGAGTGATAACACAAATGGTATGAAAGAGGTCTTAATTATCATGTTTGTTGAGTGGATGTTAGCACTTTTTGTTGCTTATTACATCGATCAGCTTTTTTCATCTGCAAGCCGGAAAAGCGCTCTGCATTTCTTGAAAACATTTCCGAAAAAACCTCATCCATCCTTTAGGAAGCCAAGCATCCAAAGTCCGGGACATAAGGTTTTTGTTCAGATGGAGAAACCTGATGTCAGTCAAGAGAGGGAGAAGGTGGAGCAGCTAATGCTTGAACCAACTATTAATCATGCAATTGTATGTGACGAACTAAAGAAGATTTATCCCGGGAGGGACGGTAACCCAGAGAAAATTGCTGTCAGTGGATTGTCCCTTGCTTTGCCTCAAAGCGGATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGAAAGACTTCATTCATCAATATGATGATTGGTCTAACAAAGCCAACCTCTGGTACTGCATTTGTTCATGGCCTGGACATAAGAACTAATATGGATGGAATATATACTAGCATGGGTGTTTGCCCACAACATGACTTGCTCTGGGAAACCCTGACAGGAAGAGAGCACCTACTCTTTTATGGCAGACTTAAGAATCTTAAAGGTTCAGCATTAACACTTGCGGTGGAAGAATCTTTGAGAGCTGTAAACCTTTTTCATGGAGGAGTTGCTGATAGACAATCTGGAAAATACAGTGGAGGAATGAAGAGGAGGCTCAGCGTCGCAATTTCATTAATCGGGGATCCTAGAGTCGTTTATATGGATGAGCCAAGCACCGGATTAGATCCTGCATCAAGAAACAACTTATGGAATGTTATTAAGCACGCAAAACAGGATCGTGCAATCATTCTCACCACACATTCCATGGAAGAGGCCGAAGTTCTATGTGATCGATTAGGAATTTTTGTTGGTGGTAGCTTGCAGTGTATAGGAAATCCAAAGGAGTTGAAAGCCAGATATGGAGGAACTTACGTGTTCACGGCGACAACATCTTTGGATCATGAAAAGGATGTCGAGAATTTGGTGCTGCAACTATCCCCAAACGCTAAGAAGATATACCATATCTCGGGGACCCAGAAGTTTGAGCTCCCTAAAGACGAGGTTAGAATATCGAATGTATTCCGAGCTGTTAACGATGCGAAAAGAAATTTCACAGTTTCTGCTTGGGGTTTAGCTGACACCACATTAGAAGATGTCTTCATCAAGGTTGCACGTAGTGCTCAGGAATTTGAAACTTTGTCATAA 2844 0.3998 MKNSPNEHTFWTQANALLRKNLTYQRRNVKTNVRLILFPFVLCLLLLLLQKLIEKQLLDKAENKCGCICTKTQGDKCLEKECGIQYSDLAQVGTCSIPNPPEWPPLLQVPVPQCRAVKSDFFPFSDLPDKSCRRNGSCPITIFFTGNNKSFGEILYENMLPSTLTINISDIMGSLALNVLGSATKPEYSNFFEPSFFSDLPIYYLQSQCRQNSTFSIPVQIASISLQKEVRCAQGLRLWRNSSSEVNNELYKGYYRSNTGRQINEISAGYDFLNSNGNKFNVSIWYNSTYKNSTGSRRIALARIPRSINMVSNAYVQFLLGPSNKILFEFVKEMPKLETPNKFDLASLLGPLFFTWVILQLFPVALISLVYEKQQKLRIMMKMHGLGDGPYWLISYGYFLALSVVYMLCFVIFGSVIGLKFFTMNDYSIQLVFYFIYINLQISWAFLLSSVFSNVKTATVTAYIGLFGSGLLAGFLFQIFVQDTSFPRGWIMVMELYPGFSLYRGLYEFSQSSFTGDTMGTHGMRWGDLSDNTNGMKEVLIIMFVEWMLALFVAYYIDQLFSSASRKSALHFLKTFPKKPHPSFRKPSIQSPGHKVFVQMEKPDVSQEREKVEQLMLEPTINHAIVCDELKKIYPGRDGNPEKIAVSGLSLALPQSGCFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVHGLDIRTNMDGIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSALTLAVEESLRAVNLFHGGVADRQSGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRNNLWNVIKHAKQDRAIILTTHSMEEAEVLCDRLGIFVGGSLQCIGNPKELKARYGGTYVFTATTSLDHEKDVENLVLQLSPNAKKIYHISGTQKFELPKDEVRISNVFRAVNDAKRNFTVSAWGLADTTLEDVFIKVARSAQEFETLS 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1007 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 624 854 IPR027417 -
Lal17g1007 947 Pfam ABC-2 family transporter protein 259 555 - -
Lal17g1007 947 ProSitePatterns ABC transporters family signature. 764 778 IPR017871 GO:0005524
Lal17g1007 947 SMART AAA_5 655 838 IPR003593 -
Lal17g1007 947 CDD ABC_subfamily_A 629 850 - -
Lal17g1007 947 Pfam ABC transporter 648 791 IPR003439 GO:0005524
Lal17g1007 947 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 7 947 - -
Lal17g1007 947 Gene3D - 615 885 IPR027417 -
Lal17g1007 947 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 862 IPR003439 GO:0005524
Lal17g1007 947 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 7 947 IPR026082 GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1007 Lal-Chr17 8202230 8215394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1007 629 849 Calmodulin-binding Proteins AT2G36910 24.255 9.68e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1007 - - gmx:100805474 1545.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1007 17 8202230 8215394 Lal17g1007 17 8202230 8215394 ECH