Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0997 ATGGGCATGGATTACTATAACATACTAAAAGTTAATCGAAACGTTAGCGATGAGGCTTTGAAAAAAGCGTATAAGAGGCTTGCAATGATTTGGCACCCCGACAAAAATCTTGTTAACAAAAGCGAAGCCGAAGCCAAATTCAAACGAATCTCCGAAGCCTATGATGTTTTAAGCGATCCTCAAAAGCGTCAGATCTATGATCTTTACGGCGAGGAAGCGCTGAAATCTGGACAGTTTCCGCCGCCGTCACAATCATCATCATCATCGTCATCTTCACGCGCTCACCAGCACCGTCATAATCCCAACGCCACCTCCTTCCGTGACGCTGATGACATTTACGCCGAGTTTTTTGGCAGCGATGGGGCTGACACTGGCGGAGGAAGTGGTGGGAGAGGTGGAGTCCGTAGGGATGGATTCTATAGGACTTCGACGAATGCCGCGCCGTTCGGGGGAGTGGGAAGGAAGGCTGCTTCTATTGAGAATGCATTGCCTTGTAACTTGGAAGATCTCTACAAAGGTGTCAAGAAAAAGATGAAGATCTCTAGGAAGGTTTATGATGCGTTTGGAAAGTGTCATAACGTGGAGGAGATTTTGACTATTGAGATAAAGCCTGGCTGGAAGAAAGGGACAAAGATTACTTTCCCCGAGAAGGGTAACCAGGAGCCTGGTGTCATCGCCGCAGATCTTATATTTGTGATAGATGAGAAACCACACGCTGTTTACAGAAGGGATGGTAATGATTTGATGGTGAACCAGGAGATAACTCTTCTCGAGGCCCTTACAGGTAAAACCTTGGAGCTCACCACCTTGGATGGAAGAAGTCTCGTGATCCCGCTGACAGATATCGTCAAACCTGGTGCTGAGGTTGTTGTCCCTAACGAAGGAATGCCGATATCAAAAGAGCCCGGGAGGAAGGGGAATTTAAGAATCAAGTTAGACGTCAAGTACCCATCAAGGCTAACCGCAGAGCAGAAATCTGATCTGAGGAGAGTATTAGGTGGAATCTCATAA 1011 0.4688 MGMDYYNILKVNRNVSDEALKKAYKRLAMIWHPDKNLVNKSEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPSQSSSSSSSSRAHQHRHNPNATSFRDADDIYAEFFGSDGADTGGGSGGRGGVRRDGFYRTSTNAAPFGGVGRKAASIENALPCNLEDLYKGVKKKMKISRKVYDAFGKCHNVEEILTIEIKPGWKKGTKITFPEKGNQEPGVIAADLIFVIDEKPHAVYRRDGNDLMVNQEITLLEALTGKTLELTTLDGRSLVIPLTDIVKPGAEVVVPNEGMPISKEPGRKGNLRIKLDVKYPSRLTAEQKSDLRRVLGGIS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0997 336 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lal17g0997 336 PANTHER BNAA06G20720D PROTEIN 2 335 - -
Lal17g0997 336 SUPERFAMILY Chaperone J-domain 3 85 IPR036869 -
Lal17g0997 336 Gene3D - 157 236 - -
Lal17g0997 336 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lal17g0997 336 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lal17g0997 336 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lal17g0997 336 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lal17g0997 336 CDD DnaJ 4 59 IPR001623 -
Lal17g0997 336 Pfam DnaJ domain 4 67 IPR001623 -
Lal17g0997 336 CDD DnaJ_C 157 320 - -
Lal17g0997 336 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 335 - -
Lal17g0997 336 Pfam DnaJ C terminal domain 160 317 IPR002939 -
Lal17g0997 336 MobiDBLite consensus disorder prediction 78 99 - -
Lal17g0997 336 MobiDBLite consensus disorder prediction 74 105 - -
Lal17g0997 336 SUPERFAMILY HSP40/DnaJ peptide-binding domain 161 238 IPR008971 GO:0006457|GO:0051082
Lal17g0997 336 Gene3D DnaJ domain 2 127 IPR036869 -
Lal17g0997 336 SUPERFAMILY HSP40/DnaJ peptide-binding domain 241 326 IPR008971 GO:0006457|GO:0051082
Lal17g0997 336 SMART dnaj_3 3 62 IPR001623 -
Lal17g0997 336 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lal17g0997 336 Gene3D - 238 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0997 Lal-Chr17 8075681 8081469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0997 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 5.74e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0997 K09510 - gmx:100781572 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0997 17 8075681 8081469 Lal17g0997 17 8075681 8081469 ECH