Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0994 ATGGGAAACTGCAATATTTGCATTAGATCAGATGTAATTGAATTCAAGAACAAAGAACCGAACCGAAGAAAACCAAACACATCCTCAGATTCCAAAAACCCGGTTTTATCACCAAGCCCAATCCGTGTTCTGAAGAACGTGATTCCACTCCCAAACGGAACCCGAATCAGCGACAAATACAAACTTGGCCGTGAACTTGGTCGCGGCGAATTCGGCATCACTTATCTCTGCATCGATAGAGAAACAAAGGAATCACTTGCATGCAAATCAATTTCGAAGAGAAAGCTTCTTACTTCAGTGGACATTGAAGATGTGAGGCGCGAGGTAGCTATATTATCAACATTGCCTGAACACCCTAACGTTGTGAAACTTAAGGCTACTTTTGAAGACAATAAGAATGTTCATATTTTGATGGAGCTATGTGAAGGAGGAGAGTTATTTGATCGAATTGTTGCGAGAGGACATTATAGTGAACGTGCTGCGGCTACTGTGGCGAAGAGTGTTGCTGAGGTTGTTAGAATGTGTCATGCTAATGGAGTTATGCATAGAGACCTCAAGCCTGAGAATTTCCTTTTTGCTAATAAGAATGAGAATTCGCCTCTTAAGGCTATTGATTTTGGACTCTCTGTGTTTTTTAAGGCTGGGGAGAGGTTTTCGGAGATTGTTGGGAGTCCTTACTATATGGCACCAGAGGTTTTGAAGAGGAATTATGGGCCGGAGATAGATGTGTGGAGTGCCGGTGTGATACTTTATATTTTGTTATGTGGTGTTCCTCCGTTTTGGGCAGAGACCGAACAAGGTGTGGCTTTGGCAATTTTGAGGGGTGTAATCGACTTCAAGAGGGAACCTTGGCCTCAGATATCAGATAGTGCTAAAAGCCTTGTGCAGCAGATGTTGGAGCCGGATCCTAAGAAGCGCTTGACTGCTGAGCAGGTGCTTGGTGGAAAGCGGAAAGGTGGAACATTTGAAGTGAAAGTCAGTGTGGTAACACTTTCTTGGTATGACAGTATTATGAGAAGGTGGGAACTAAAATTATTTGTTTTTGTAGAACACCCGTGGCTACAAAATGCAAAGAAAGCTCCAAATGTTCCATTAGGAGATATTGTTAGGTCGAGGCTTAAGCAGTTCGCAGTCATGAATAGATTCAAAAAGAAAGCTTTGCGGGTTATTGTGGAGTACTTATCTGTTGAAGAAGTAGAAATAATCAAAGATATATTTACATTGATGGATACTGACAATGATGGAAGAGTAACATTTGAGGAACTGAAGAGTGGGTTGAGGAAGGTTGGTTCACAATTGGCTGAACCAGAAATAAAGATGTTGATGGAAGTGGCGGATGTCGATGGGAATGGAGTACTTGACTACGGAGAGTTTGTAGCTGTGACGCTTCACTTGCAAAAAATAGAGAATGATGAGCATATCCACAAAGCATTCAAGTTTTTTGACAAAGATGGGAGTGGGTATATTGAGTTAGGTGAGCTGCAGGACGCATTGACGGATGAGTCGGGAGAAACAGATGTTGATGTGTTGACTGACATCATGTGTGATGTTGACACCGATAAGGATGGTCGTATCAGTTATGAGGAGTTCGTTGCCATGATGAAAACCGGAACGGACTGGAGAAAAGCGTCTAGGCAGTATTCAAGGGAGAGATTCAAGAATTTGAGCCAAAATTTGATGAAGGATGTCTCACTTCAGCTTCATGATGAAATTAGTGGTCAAGGTGTAGTGGTTTGA 1737 0.4226 MGNCNICIRSDVIEFKNKEPNRRKPNTSSDSKNPVLSPSPIRVLKNVIPLPNGTRISDKYKLGRELGRGEFGITYLCIDRETKESLACKSISKRKLLTSVDIEDVRREVAILSTLPEHPNVVKLKATFEDNKNVHILMELCEGGELFDRIVARGHYSERAAATVAKSVAEVVRMCHANGVMHRDLKPENFLFANKNENSPLKAIDFGLSVFFKAGERFSEIVGSPYYMAPEVLKRNYGPEIDVWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISDSAKSLVQQMLEPDPKKRLTAEQVLGGKRKGGTFEVKVSVVTLSWYDSIMRRWELKLFVFVEHPWLQNAKKAPNVPLGDIVRSRLKQFAVMNRFKKKALRVIVEYLSVEEVEIIKDIFTLMDTDNDGRVTFEELKSGLRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTLHLQKIENDEHIHKAFKFFDKDGSGYIELGELQDALTDESGETDVDVLTDIMCDVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKNLSQNLMKDVSLQLHDEISGQGVVV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0994 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Lal17g0994 578 MobiDBLite consensus disorder prediction 18 38 - -
Lal17g0994 578 SMART efh_1 509 537 IPR002048 GO:0005509
Lal17g0994 578 SMART efh_1 473 501 IPR002048 GO:0005509
Lal17g0994 578 SMART efh_1 401 429 IPR002048 GO:0005509
Lal17g0994 578 SMART efh_1 437 465 IPR002048 GO:0005509
Lal17g0994 578 CDD STKc_CAMK 59 313 - -
Lal17g0994 578 ProSiteProfiles EF-hand calcium-binding domain profile. 469 504 IPR002048 GO:0005509
Lal17g0994 578 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 314 - -
Lal17g0994 578 PANTHER SERINE/THREONINE-PROTEIN KINASE 349 554 - -
Lal17g0994 578 ProSitePatterns EF-hand calcium-binding domain. 446 458 IPR018247 -
Lal17g0994 578 SUPERFAMILY Protein kinase-like (PK-like) 35 320 IPR011009 -
Lal17g0994 578 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Lal17g0994 578 Gene3D Transferase(Phosphotransferase) domain 1 146 327 - -
Lal17g0994 578 ProSiteProfiles Protein kinase domain profile. 60 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0994 578 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Lal17g0994 578 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Lal17g0994 578 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Lal17g0994 578 SMART serkin_6 60 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0994 578 SUPERFAMILY EF-hand 382 561 IPR011992 -
Lal17g0994 578 ProSiteProfiles EF-hand calcium-binding domain profile. 505 540 IPR002048 GO:0005509
Lal17g0994 578 Gene3D - 345 536 - -
Lal17g0994 578 ProSiteProfiles EF-hand calcium-binding domain profile. 433 468 IPR002048 GO:0005509
Lal17g0994 578 ProSitePatterns EF-hand calcium-binding domain. 518 530 IPR018247 -
Lal17g0994 578 Gene3D Phosphorylase Kinase; domain 1 62 145 - -
Lal17g0994 578 CDD EFh 473 535 IPR002048 GO:0005509
Lal17g0994 578 Pfam Protein kinase domain 60 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal17g0994 578 Pfam EF-hand domain pair 472 535 IPR002048 GO:0005509
Lal17g0994 578 Pfam EF-hand domain pair 402 461 IPR002048 GO:0005509
Lal17g0994 578 PANTHER BNAA09G44420D PROTEIN 349 554 - -
Lal17g0994 578 PANTHER BNAA09G44420D PROTEIN 24 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0994 Lal-Chr17 8046468 8052271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0994 1 578 EF-hand Containing Proteins AT1G74740 71.034 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal17g0994 Pkinase 5.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0994 K13412 - gmx:100809838 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0994 17 8046468 8052271 Lal17g0994 17 8046468 8052271 ECH