Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0982 ATGCAGTGGTCCTGGGTAGCGAATCGGTGGACAGGTGTAGCCGCATCCATATGGATCCAGTGGAGCTGCGGTGCATCCTACACCTTCAGCATATACTCCCCAATTCTTAAATCCACCCAGGGCTACGACCAATCCACCCTCGACACCGTCTCCGTCTTCAAAGACATCGGTGCCAATTTCGGCATCTTATCCGGCCTCCTCTACTCTGCCGTCTCTCCGTACAACAATCCCCACCGCGATAATGACACCCGAGGCTCACCCAAGTCTAAATGGGCATCGTTGGGTGGGCCCTGGGTGGTAATCGCGGCGGGGGCGATTCAATGTTTCATTGGGTTTATGTTTATATGGGCTTCTGTTGCTGGGCTGATTGACCCGCCTCCTTTACCGGTTATGTGTTTTTTTGCATGGCTTGGTTCTAATGGTCAGACTTTCTTGAACACCACTAATGTTGTAACTAGCTTGCGTAATTTTCCTCAGTATAGTGGCACCATTGTTGGCATCATGAAGGGTTTTCTTGGACTCAGCGGAGCAATCCTTATCCAACTGTATCACACATTTTGTGATAGGGACCCTACCACCTACCTTTTGATGATTGCTTGCTTGCCTACATTTATCTGCATATTGCTTATGTTCCTGGTGAGGATCTATGAAGTGTACAACGGTGATTACAAGGAGCATTTGAATGGTTTCTCTTTGGTCACTGTGATTATTGTTGCTTATCTCATGTTCATAATAATTTCGCAAAACTTCTTCATCTTCCCATCTTGGGCACATATATTTACATTTATAATCCTTATGGTTCTTCTAGCATTGCCTTTCGGTATTGCTATCAAAGCCCATTCGGAGGAGTCACATCAAATTGCACAAGCCTGTATGTTTGATTCAACTTCTAGTTCTTCTCCATCAGCGGATAAAGTGGAATACCAAGAGCTTCCTAGTGATGTGACCGAGGTAGAGCCGATTTCAGATGACATGTTACCCCCTGAAGAAGAAATGAACCTGTTGCAAGCTATGTACACAGTTGAATTTTGGATGTTGTTCGTAACCATGATATCGGGGTTGGGCTCTGGCCTGGCAACAATAAATAACATGAGCCAAATAGGAGAATCTCTTGGCTATAGTATTAAAGAGATTAATAATTTGGTGTCACTGTGGAGCATGTGGAATTTTCTTGGCCGTTTTGGAGGTGGCTATGTATCAGATTATATCATGCATAGAAAAGGTTGGCCTAGGCCTTTGTTTATGACTGCGACTCTGGGGATCATGATTCTCGGCCATGTAATTATTGCTTCTGGTTTTCGTGGAAATCTGTATTTGGGTCCTGTCCTGGTGGGCATATGCTATGGTGCAAATTGGTCCTTAATGCCTACAATAACTTCTGAGATATTTGGTGTAAAGCATATGGGTACCATTTTCAACACTATTGCTGCAGCAAGTCCACTTGGATCTTATATACTCTCTGTGAGAGTTGTTGGATATATTTATGACAAGGAGGCCAATAAAGAAGATAACTCGTGCTTCGGCATCCACTGTTTCATGTCATCGTTTTTTATCCTAGCTGGAGTGGCTTTTCTTGCATTTTTGGTTTGCCTGCTATTACACTTCCGCACCCGAAGGTTCTATAAGCTAGTTGTGCTTAGAAGATTAAAACAATCTGTACGATATTGA 1668 0.4376 MQWSWVANRWTGVAASIWIQWSCGASYTFSIYSPILKSTQGYDQSTLDTVSVFKDIGANFGILSGLLYSAVSPYNNPHRDNDTRGSPKSKWASLGGPWVVIAAGAIQCFIGFMFIWASVAGLIDPPPLPVMCFFAWLGSNGQTFLNTTNVVTSLRNFPQYSGTIVGIMKGFLGLSGAILIQLYHTFCDRDPTTYLLMIACLPTFICILLMFLVRIYEVYNGDYKEHLNGFSLVTVIIVAYLMFIIISQNFFIFPSWAHIFTFIILMVLLALPFGIAIKAHSEESHQIAQACMFDSTSSSSPSADKVEYQELPSDVTEVEPISDDMLPPEEEMNLLQAMYTVEFWMLFVTMISGLGSGLATINNMSQIGESLGYSIKEINNLVSLWSMWNFLGRFGGGYVSDYIMHRKGWPRPLFMTATLGIMILGHVIIASGFRGNLYLGPVLVGICYGANWSLMPTITSEIFGVKHMGTIFNTIAAASPLGSYILSVRVVGYIYDKEANKEDNSCFGIHCFMSSFFILAGVAFLAFLVCLLLHFRTRRFYKLVVLRRLKQSVRY 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0982 555 SUPERFAMILY MFS general substrate transporter 4 214 IPR036259 -
Lal17g0982 555 Gene3D MFS general substrate transporter like domains 341 554 IPR036259 -
Lal17g0982 555 CDD MFS_Mch1p_like 9 526 - -
Lal17g0982 555 Pfam Nodulin-like 9 70 IPR010658 -
Lal17g0982 555 Pfam Nodulin-like 97 276 IPR010658 -
Lal17g0982 555 SUPERFAMILY MFS general substrate transporter 237 539 IPR036259 -
Lal17g0982 555 Pfam Major Facilitator Superfamily 346 536 IPR011701 GO:0022857|GO:0055085
Lal17g0982 555 ProSiteProfiles Major facilitator superfamily (MFS) profile. 341 555 IPR020846 GO:0022857
Lal17g0982 555 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 552 - -
Lal17g0982 555 PANTHER F25A4.25 PROTEIN 6 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0982 Lal-Chr17 7992329 7996672 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0982 8 551 Nodulin-like Gene Family AT1G74780 56.985 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0982 - - gmx:100799596 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0982 17 7992329 7996672 Lal17g0982 17 7992329 7996672 ECH